Protein : Qrob_P0230600.2 Q. robur
Protein Identifier  ? Qrob_P0230600.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=17) 4.2.3.15 - Myrcene synthase. Code Enzyme  EC:4.2.3.15
Gene Prediction Quality  validated Protein length 

Sequence

Length: 269  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0010333 terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100261705 15 268 + 254 Gaps:18 46.10 590 67.28 2e-124 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100263483 15 268 + 254 Gaps:18 32.04 849 65.81 5e-119 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100232956 10 268 + 259 Gaps:18 46.95 590 63.90 3e-118 (-)-a-terpineol synthase (EC:4.2.3.111)
blastp_kegg lcl|rcu:RCOM_0766900 15 268 + 254 Gaps:19 49.55 551 65.20 3e-118 (R)-limonene synthase putative (EC:4.2.3.20)
blastp_kegg lcl|vvi:100254181 10 268 + 259 Gaps:18 47.59 582 63.18 6e-117 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100266404 10 268 + 259 Gaps:18 46.95 590 62.09 3e-115 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100259297 10 268 + 259 Gaps:18 46.63 594 61.01 1e-113 myrcene synthase chloroplastic-like
blastp_kegg lcl|pop:POPTR_0121s00210g 10 268 + 259 Gaps:18 50.55 548 61.01 4e-113 terpene synthase/cyclase family protein
blastp_kegg lcl|vvi:100250958 10 268 + 259 Gaps:18 46.63 594 61.01 1e-112 myrcene synthase chloroplastic-like
blastp_kegg lcl|pop:POPTR_0019s014601 10 268 + 259 Gaps:18 54.00 513 60.65 7e-112 hypothetical protein
blastp_pdb 2j5c_B 15 268 + 254 Gaps:19 47.63 569 49.82 5e-87 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_pdb 2j5c_A 15 268 + 254 Gaps:19 47.63 569 49.82 5e-87 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_pdb 2onh_B 15 268 + 254 Gaps:19 50.28 543 47.62 3e-84 mol:protein length:543 4S-limonene synthase
blastp_pdb 2onh_A 15 268 + 254 Gaps:19 50.28 543 47.62 3e-84 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_B 15 268 + 254 Gaps:19 50.28 543 47.62 3e-84 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_A 15 268 + 254 Gaps:19 50.28 543 47.62 3e-84 mol:protein length:543 4S-limonene synthase
blastp_pdb 1n24_B 15 268 + 254 Gaps:21 49.73 549 47.25 1e-75 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n24_A 15 268 + 254 Gaps:21 49.73 549 47.25 1e-75 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n23_B 15 268 + 254 Gaps:21 49.73 549 47.25 1e-75 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n23_A 15 268 + 254 Gaps:21 49.73 549 47.25 1e-75 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_uniprot_sprot sp|Q93X23|MYRS_QUEIL 15 268 + 254 Gaps:18 45.56 597 69.49 2e-130 Myrcene synthase chloroplastic OS Quercus ilex PE 1 SV 1
blastp_uniprot_sprot sp|Q6PWU2|ATESY_VITVI 10 268 + 259 Gaps:18 46.95 590 63.90 9e-120 (-)-alpha-terpineol synthase OS Vitis vinifera PE 1 SV 1
blastp_uniprot_sprot sp|B9T536|TPS10_RICCO 15 268 + 254 Gaps:19 49.55 551 65.20 1e-119 Terpene synthase 10 OS Ricinus communis GN TPS10 PE 2 SV 1
blastp_uniprot_sprot sp|B3TPQ7|ATESY_MAGGA 10 268 + 259 Gaps:20 46.79 592 57.04 4e-102 Alpha-terpineol synthase chloroplastic OS Magnolia grandiflora PE 1 SV 1
blastp_uniprot_sprot sp|Q8L5K4|GTPS_CITLI 15 268 + 254 Gaps:20 45.67 600 56.57 4e-99 Gamma-terpinene synthase chloroplastic OS Citrus limon PE 1 SV 1
blastp_uniprot_sprot sp|A7IZZ1|TPS1_CANSA 15 268 + 254 Gaps:20 44.05 622 52.92 2e-94 (-)-limonene synthase chloroplastic OS Cannabis sativa GN TPS1 PE 1 SV 1
blastp_uniprot_sprot sp|O81191|SCS_SALOF 15 268 + 254 Gaps:19 45.85 591 49.45 3e-86 1 8-cineole synthase chloroplastic OS Salvia officinalis PE 1 SV 1
blastp_uniprot_sprot sp|Q9LRZ6|MYRS2_ARATH 15 268 + 254 Gaps:23 46.32 598 48.74 1e-85 Beta-myrcene/(E)-beta-ocimene synthase 2 chloroplastic OS Arabidopsis thaliana GN TPS24 PE 1 SV 1
blastp_uniprot_sprot sp|A7IZZ2|TPS2_CANSA 15 268 + 254 Gaps:20 44.55 615 49.27 3e-84 (+)-alpha-pinene synthase chloroplastic OS Cannabis sativa PE 1 SV 1
blastp_uniprot_sprot sp|J7LQ09|TPS7_PHYDL 15 268 + 254 Gaps:19 50.00 542 49.82 3e-84 Trans-alpha-bergamotene synthase OS Phyla dulcis PE 1 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 14 268 255 SSF48576 none none IPR008949
PANTHER 14 268 255 PTHR31225 none none none
PANTHER 14 268 255 PTHR31225:SF0 none none none
Pfam 14 240 227 PF03936 none Terpene synthase family, metal binding domain IPR005630
Gene3D 14 268 255 G3DSA:1.10.600.10 none none IPR008949

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting