Protein : Qrob_P0230590.2 Q. robur
Protein Identifier  ? Qrob_P0230590.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=17) 4.2.3.15 - Myrcene synthase. Code Enzyme  EC:4.2.3.15
Gene Prediction Quality  validated Protein length 

Sequence

Length: 305  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0010333 terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100261705 3 301 + 299 none 50.68 590 68.90 1e-150 myrcene synthase chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0766900 2 301 + 300 Gaps:1 54.63 551 66.11 1e-146 (R)-limonene synthase putative (EC:4.2.3.20)
blastp_kegg lcl|vvi:100263483 3 301 + 299 none 35.22 849 67.56 3e-145 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100232956 2 300 + 299 none 50.68 590 65.22 1e-142 (-)-a-terpineol synthase (EC:4.2.3.111)
blastp_kegg lcl|vvi:100254181 2 300 + 299 none 51.37 582 65.55 4e-142 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100250958 2 304 + 303 none 51.01 594 63.70 1e-141 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100259297 2 304 + 303 none 51.01 594 63.70 4e-141 myrcene synthase chloroplastic-like
blastp_kegg lcl|pop:POPTR_0019s014601 3 299 + 297 none 57.89 513 63.97 5e-139 hypothetical protein
blastp_kegg lcl|vvi:100266404 2 300 + 299 none 50.68 590 63.88 8e-139 myrcene synthase chloroplastic-like
blastp_kegg lcl|pop:POPTR_0019s01340g 3 299 + 297 none 50.42 589 63.30 5e-136 terpene synthase/cyclase family protein
blastp_pdb 2onh_B 3 282 + 280 Gaps:3 51.75 543 49.82 7e-99 mol:protein length:543 4S-limonene synthase
blastp_pdb 2onh_A 3 282 + 280 Gaps:3 51.75 543 49.82 7e-99 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_B 3 282 + 280 Gaps:3 51.75 543 49.82 7e-99 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_A 3 282 + 280 Gaps:3 51.75 543 49.82 7e-99 mol:protein length:543 4S-limonene synthase
blastp_pdb 3n0g_B 3 303 + 301 Gaps:1 54.41 555 46.69 1e-96 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0g_A 3 303 + 301 Gaps:1 54.41 555 46.69 1e-96 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_B 3 303 + 301 Gaps:1 54.41 555 46.69 1e-96 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_A 3 303 + 301 Gaps:1 54.41 555 46.69 1e-96 mol:protein length:555 Isoprene synthase
blastp_pdb 2j5c_B 3 303 + 301 Gaps:7 52.02 569 47.97 2e-95 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_pdb 2j5c_A 3 303 + 301 Gaps:7 52.02 569 47.97 2e-95 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_uniprot_sprot sp|Q93X23|MYRS_QUEIL 2 304 + 303 none 50.75 597 69.97 2e-157 Myrcene synthase chloroplastic OS Quercus ilex PE 1 SV 1
blastp_uniprot_sprot sp|B9T536|TPS10_RICCO 2 301 + 300 Gaps:1 54.63 551 66.11 4e-148 Terpene synthase 10 OS Ricinus communis GN TPS10 PE 2 SV 1
blastp_uniprot_sprot sp|Q6PWU2|ATESY_VITVI 2 300 + 299 none 50.68 590 65.22 4e-144 (-)-alpha-terpineol synthase OS Vitis vinifera PE 1 SV 1
blastp_uniprot_sprot sp|Q8L5K4|GTPS_CITLI 3 300 + 298 Gaps:3 49.83 600 60.87 2e-127 Gamma-terpinene synthase chloroplastic OS Citrus limon PE 1 SV 1
blastp_uniprot_sprot sp|B3TPQ7|ATESY_MAGGA 2 301 + 300 Gaps:2 50.68 592 59.00 8e-124 Alpha-terpineol synthase chloroplastic OS Magnolia grandiflora PE 1 SV 1
blastp_uniprot_sprot sp|Q8L5K3|RLC1_CITLI 2 301 + 300 Gaps:2 49.83 606 56.62 9e-120 (R)-limonene synthase 1 OS Citrus limon PE 2 SV 1
blastp_uniprot_sprot sp|A7IZZ1|TPS1_CANSA 3 301 + 299 Gaps:2 48.39 622 51.83 4e-109 (-)-limonene synthase chloroplastic OS Cannabis sativa GN TPS1 PE 1 SV 1
blastp_uniprot_sprot sp|G1JUH1|TPS3_SOLLC 3 301 + 299 Gaps:3 49.75 607 50.66 1e-104 (-)-camphene/tricyclene synthase chloroplastic OS Solanum lycopersicum GN TPS3 PE 1 SV 1
blastp_uniprot_sprot sp|J7LQ09|TPS7_PHYDL 3 301 + 299 Gaps:1 54.98 542 49.33 2e-104 Trans-alpha-bergamotene synthase OS Phyla dulcis PE 1 SV 1
blastp_uniprot_sprot sp|Q9LRZ6|MYRS2_ARATH 3 301 + 299 Gaps:6 51.00 598 49.18 1e-103 Beta-myrcene/(E)-beta-ocimene synthase 2 chloroplastic OS Arabidopsis thaliana GN TPS24 PE 1 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 2 300 299 G3DSA:1.10.600.10 none none IPR008949
PANTHER 3 301 299 PTHR31225 none none none
SUPERFAMILY 2 301 300 SSF48576 none none IPR008949
Pfam 2 246 245 PF03936 none Terpene synthase family, metal binding domain IPR005630
PANTHER 3 301 299 PTHR31225:SF0 none none none

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 49   Mitochondrion 2 0.029 0.888 NON-PLANT 49