Protein : Qrob_P0230580.2 Q. robur
Protein Identifier  ? Qrob_P0230580.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=17) 4.2.3.15 - Myrcene synthase. Code Enzyme  EC:4.2.3.15
Gene Prediction Quality  validated Protein length 

Sequence

Length: 598  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0010333 terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100261705 1 594 + 594 Gaps:9 99.83 590 63.33 0.0 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100232956 1 593 + 593 Gaps:10 99.15 590 60.85 0.0 (-)-a-terpineol synthase (EC:4.2.3.111)
blastp_kegg lcl|vvi:100263483 1 594 + 594 Gaps:20 96.23 849 58.26 0.0 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100266404 1 593 + 593 Gaps:28 99.15 590 61.37 0.0 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100254181 2 593 + 592 Gaps:39 98.45 582 63.00 0.0 myrcene synthase chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0766900 46 594 + 549 Gaps:2 100.00 551 62.25 0.0 (R)-limonene synthase putative (EC:4.2.3.20)
blastp_kegg lcl|vvi:100250958 1 597 + 597 Gaps:10 99.16 594 59.59 0.0 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100259297 1 597 + 597 Gaps:10 99.16 594 59.76 0.0 myrcene synthase chloroplastic-like
blastp_kegg lcl|pop:POPTR_0019s01340g 1 592 + 592 Gaps:13 100.00 589 59.08 0.0 terpene synthase/cyclase family protein
blastp_kegg lcl|pop:POPTR_0121s00210g 52 592 + 541 Gaps:2 99.09 548 61.14 0.0 terpene synthase/cyclase family protein
blastp_pdb 2onh_B 57 575 + 519 Gaps:8 96.69 543 49.33 2e-179 mol:protein length:543 4S-limonene synthase
blastp_pdb 2onh_A 57 575 + 519 Gaps:8 96.69 543 49.33 2e-179 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_B 57 575 + 519 Gaps:8 96.69 543 49.33 2e-179 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_A 57 575 + 519 Gaps:8 96.69 543 49.33 2e-179 mol:protein length:543 4S-limonene synthase
blastp_pdb 1n24_B 57 591 + 535 Gaps:8 98.91 549 48.07 9e-175 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n24_A 57 591 + 535 Gaps:8 98.91 549 48.07 9e-175 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n23_B 57 591 + 535 Gaps:8 98.91 549 48.07 9e-175 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n23_A 57 591 + 535 Gaps:8 98.91 549 48.07 9e-175 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n22_B 57 591 + 535 Gaps:8 98.91 549 48.07 9e-175 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n22_A 57 591 + 535 Gaps:8 98.91 549 48.07 9e-175 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_uniprot_sprot sp|Q93X23|MYRS_QUEIL 1 597 + 597 Gaps:6 100.00 597 69.18 0.0 Myrcene synthase chloroplastic OS Quercus ilex PE 1 SV 1
blastp_uniprot_sprot sp|Q6PWU2|ATESY_VITVI 1 593 + 593 Gaps:10 99.15 590 60.85 0.0 (-)-alpha-terpineol synthase OS Vitis vinifera PE 1 SV 1
blastp_uniprot_sprot sp|B9T536|TPS10_RICCO 46 594 + 549 Gaps:2 100.00 551 62.25 0.0 Terpene synthase 10 OS Ricinus communis GN TPS10 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L5K4|GTPS_CITLI 1 593 + 593 Gaps:39 100.00 600 57.67 0.0 Gamma-terpinene synthase chloroplastic OS Citrus limon PE 1 SV 1
blastp_uniprot_sprot sp|B3TPQ7|ATESY_MAGGA 1 594 + 594 Gaps:25 99.49 592 54.84 0.0 Alpha-terpineol synthase chloroplastic OS Magnolia grandiflora PE 1 SV 1
blastp_uniprot_sprot sp|Q8L5K3|RLC1_CITLI 42 594 + 553 Gaps:11 91.42 606 54.51 0.0 (R)-limonene synthase 1 OS Citrus limon PE 2 SV 1
blastp_uniprot_sprot sp|A7IZZ1|TPS1_CANSA 29 594 + 566 Gaps:17 92.77 622 50.26 0.0 (-)-limonene synthase chloroplastic OS Cannabis sativa GN TPS1 PE 1 SV 1
blastp_uniprot_sprot sp|G1JUH1|TPS3_SOLLC 20 594 + 575 Gaps:20 96.71 607 48.55 0.0 (-)-camphene/tricyclene synthase chloroplastic OS Solanum lycopersicum GN TPS3 PE 1 SV 1
blastp_uniprot_sprot sp|A7IZZ2|TPS2_CANSA 14 594 + 581 Gaps:19 95.61 615 49.83 0.0 (+)-alpha-pinene synthase chloroplastic OS Cannabis sativa PE 1 SV 1
blastp_uniprot_sprot sp|J7LQ09|TPS7_PHYDL 57 594 + 538 Gaps:7 99.45 542 50.09 0.0 Trans-alpha-bergamotene synthase OS Phyla dulcis PE 1 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 84 281 198 G3DSA:1.50.30.10 none none IPR001906
Pfam 271 539 269 PF03936 none Terpene synthase family, metal binding domain IPR005630
PANTHER 31 594 564 PTHR31225 none none none
PANTHER 31 594 564 PTHR31225:SF0 none none none
Pfam 68 241 174 PF01397 none Terpene synthase, N-terminal domain IPR001906
Gene3D 282 593 312 G3DSA:1.10.600.10 none none IPR008949
SUPERFAMILY 268 594 327 SSF48576 none none IPR008949
SUPERFAMILY 64 267 204 SSF48239 none none IPR008930

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting