Protein : Qrob_P0230550.2 Q. robur
Protein Identifier  ? Qrob_P0230550.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=17) 4.2.3.15 - Myrcene synthase. Code Enzyme  EC:4.2.3.15
Gene Prediction Quality  validated Protein length 

Sequence

Length: 245  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0010333 terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100261705 9 244 + 236 Gaps:52 44.75 590 58.71 3e-94 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100263483 9 244 + 236 Gaps:52 31.10 849 57.95 3e-90 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100232956 9 244 + 236 Gaps:52 44.75 590 56.06 4e-88 (-)-a-terpineol synthase (EC:4.2.3.111)
blastp_kegg lcl|vvi:100254181 9 244 + 236 Gaps:52 45.36 582 55.30 4e-86 myrcene synthase chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0766900 9 244 + 236 Gaps:53 48.09 551 56.23 1e-85 (R)-limonene synthase putative (EC:4.2.3.20)
blastp_kegg lcl|vvi:100266404 9 244 + 236 Gaps:52 44.75 590 53.79 8e-84 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100259297 9 244 + 236 Gaps:52 44.44 594 53.03 2e-83 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100250958 9 244 + 236 Gaps:52 44.44 594 53.03 4e-82 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100246333 9 244 + 236 Gaps:56 44.97 596 52.99 5e-82 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100245817 9 244 + 236 Gaps:52 43.71 604 53.03 1e-81 myrcene synthase chloroplastic-like
blastp_pdb 2j5c_B 10 244 + 235 Gaps:53 46.05 569 43.89 3e-62 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_pdb 2j5c_A 10 244 + 235 Gaps:53 46.05 569 43.89 3e-62 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_pdb 2onh_B 9 244 + 236 Gaps:57 48.80 543 43.77 4e-61 mol:protein length:543 4S-limonene synthase
blastp_pdb 2onh_A 9 244 + 236 Gaps:57 48.80 543 43.77 4e-61 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_B 9 244 + 236 Gaps:57 48.80 543 43.77 4e-61 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_A 9 244 + 236 Gaps:57 48.80 543 43.77 4e-61 mol:protein length:543 4S-limonene synthase
blastp_pdb 1n24_B 9 244 + 236 Gaps:55 48.27 549 41.89 5e-55 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n24_A 9 244 + 236 Gaps:55 48.27 549 41.89 5e-55 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n23_B 9 244 + 236 Gaps:55 48.27 549 41.89 5e-55 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n23_A 9 244 + 236 Gaps:55 48.27 549 41.89 5e-55 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_uniprot_sprot sp|Q93X23|MYRS_QUEIL 9 244 + 236 Gaps:52 44.22 597 62.12 4e-102 Myrcene synthase chloroplastic OS Quercus ilex PE 1 SV 1
blastp_uniprot_sprot sp|Q6PWU2|ATESY_VITVI 9 244 + 236 Gaps:52 44.75 590 56.06 2e-89 (-)-alpha-terpineol synthase OS Vitis vinifera PE 1 SV 1
blastp_uniprot_sprot sp|B9T536|TPS10_RICCO 9 244 + 236 Gaps:53 48.09 551 56.23 4e-87 Terpene synthase 10 OS Ricinus communis GN TPS10 PE 2 SV 1
blastp_uniprot_sprot sp|B3TPQ7|ATESY_MAGGA 9 244 + 236 Gaps:54 44.59 592 49.62 2e-71 Alpha-terpineol synthase chloroplastic OS Magnolia grandiflora PE 1 SV 1
blastp_uniprot_sprot sp|Q8L5K4|GTPS_CITLI 9 244 + 236 Gaps:54 44.33 600 49.25 1e-70 Gamma-terpinene synthase chloroplastic OS Citrus limon PE 1 SV 1
blastp_uniprot_sprot sp|A7IZZ1|TPS1_CANSA 9 244 + 236 Gaps:54 42.77 622 45.86 4e-67 (-)-limonene synthase chloroplastic OS Cannabis sativa GN TPS1 PE 1 SV 1
blastp_uniprot_sprot sp|Q672F7|TPS2_LOTJA 10 244 + 235 Gaps:52 44.20 595 45.25 2e-60 Tricyclene synthase EBOS chloroplastic OS Lotus japonicus GN EBOS PE 1 SV 1
blastp_uniprot_sprot sp|O81191|SCS_SALOF 10 244 + 235 Gaps:57 44.33 591 43.51 4e-60 1 8-cineole synthase chloroplastic OS Salvia officinalis PE 1 SV 1
blastp_uniprot_sprot sp|A7IZZ2|TPS2_CANSA 7 244 + 238 Gaps:53 43.41 615 42.70 4e-60 (+)-alpha-pinene synthase chloroplastic OS Cannabis sativa PE 1 SV 1
blastp_uniprot_sprot sp|P0DI77|CIN2_ARATH 10 244 + 235 Gaps:56 44.50 600 43.07 9e-60 1 8-cineole synthase 2 chloroplastic OS Arabidopsis thaliana GN TPS23 PE 1 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 9 244 236 PTHR31225:SF0 none none none
Gene3D 7 244 238 G3DSA:1.10.600.10 none none IPR008949
SUPERFAMILY 9 244 236 SSF48576 none none IPR008949
PANTHER 9 244 236 PTHR31225 none none none
Pfam 9 216 208 PF03936 none Terpene synthase family, metal binding domain IPR005630

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting