Protein : Qrob_P0217670.2 Q. robur
Protein Identifier  ? Qrob_P0217670.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=5) 5.1.3.3 - Aldose 1-epimerase. Code Enzyme  EC:5.1.3.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 363  
Kegg Orthology  K01785
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0030246 carbohydrate binding Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
GO:0016853 isomerase activity Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
GO:0019318 hexose metabolic process The chemical reactions and pathways involving a hexose, any monosaccharide with a chain of six carbon atoms in the molecule.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100256158 1 356 + 356 Gaps:2 99.16 359 69.38 9e-176 aldose 1-epimerase-like
blastp_kegg lcl|vvi:100245569 1 356 + 356 Gaps:2 99.16 359 69.38 1e-175 aldose 1-epimerase-like
blastp_kegg lcl|pper:PRUPE_ppa024124mg 1 357 + 357 Gaps:3 98.36 366 65.56 3e-171 hypothetical protein
blastp_kegg lcl|csv:101226474 1 357 + 357 Gaps:2 99.72 360 65.74 2e-170 aldose 1-epimerase-like
blastp_kegg lcl|csv:101203750 1 357 + 357 Gaps:2 99.72 360 65.74 2e-170 aldose 1-epimerase-like
blastp_kegg lcl|pmum:103329983 1 357 + 357 Gaps:3 98.36 366 65.56 3e-170 aldose 1-epimerase-like
blastp_kegg lcl|cit:102625926 5 358 + 354 Gaps:1 98.07 362 65.63 7e-169 aldose 1-epimerase-like
blastp_kegg lcl|mdm:103404424 1 356 + 356 Gaps:3 97.82 367 64.35 9e-168 aldose 1-epimerase
blastp_kegg lcl|cmo:103487014 1 357 + 357 Gaps:2 93.73 383 64.62 2e-167 aldose 1-epimerase
blastp_kegg lcl|pop:POPTR_0017s11660g 1 357 + 357 Gaps:4 99.72 358 63.87 4e-167 hypothetical protein
blastp_pdb 1so0_D 31 356 + 326 Gaps:11 92.73 344 42.63 1e-79 mol:protein length:344 aldose 1-epimerase
blastp_pdb 1so0_C 31 356 + 326 Gaps:11 92.73 344 42.63 1e-79 mol:protein length:344 aldose 1-epimerase
blastp_pdb 1so0_B 31 356 + 326 Gaps:11 92.73 344 42.63 1e-79 mol:protein length:344 aldose 1-epimerase
blastp_pdb 1so0_A 31 356 + 326 Gaps:11 92.73 344 42.63 1e-79 mol:protein length:344 aldose 1-epimerase
blastp_pdb 1snz_B 31 356 + 326 Gaps:11 92.73 344 42.63 1e-79 mol:protein length:344 aldose 1-epimerase
blastp_pdb 1snz_A 31 356 + 326 Gaps:11 92.73 344 42.63 1e-79 mol:protein length:344 aldose 1-epimerase
blastp_pdb 1lur_B 29 356 + 328 Gaps:12 95.58 339 30.25 2e-39 mol:protein length:339 aldose 1-epimerase
blastp_pdb 1lur_A 29 356 + 328 Gaps:12 95.58 339 30.25 2e-39 mol:protein length:339 aldose 1-epimerase
blastp_pdb 1z45_A 38 356 + 319 Gaps:31 45.21 699 29.43 5e-27 mol:protein length:699 GAL10 bifunctional protein
blastp_pdb 1yga_B 38 356 + 319 Gaps:36 93.86 342 29.28 8e-25 mol:protein length:342 Hypothetical 37.9 kDa protein in BIO3-HXT17 i
blastp_uniprot_sprot sp|Q5EA79|GALM_BOVIN 18 356 + 339 Gaps:13 97.08 342 43.67 3e-82 Aldose 1-epimerase OS Bos taurus GN GALM PE 2 SV 1
blastp_uniprot_sprot sp|Q9GKX6|GALM_PIG 31 356 + 326 Gaps:11 93.27 342 44.20 6e-82 Aldose 1-epimerase OS Sus scrofa GN GALM PE 2 SV 1
blastp_uniprot_sprot sp|Q66HG4|GALM_RAT 31 356 + 326 Gaps:11 93.27 342 43.26 1e-80 Aldose 1-epimerase OS Rattus norvegicus GN Galm PE 1 SV 1
blastp_uniprot_sprot sp|Q96C23|GALM_HUMAN 31 356 + 326 Gaps:11 93.27 342 42.63 4e-79 Aldose 1-epimerase OS Homo sapiens GN GALM PE 1 SV 1
blastp_uniprot_sprot sp|Q5R8U1|GALM_PONAB 31 356 + 326 Gaps:11 93.27 342 42.63 5e-79 Aldose 1-epimerase OS Pongo abelii GN GALM PE 2 SV 1
blastp_uniprot_sprot sp|Q8K157|GALM_MOUSE 31 356 + 326 Gaps:11 93.27 342 42.32 1e-78 Aldose 1-epimerase OS Mus musculus GN Galm PE 2 SV 1
blastp_uniprot_sprot sp|P05149|GALM_ACICA 26 359 + 334 Gaps:21 91.08 381 34.01 1e-58 Aldose 1-epimerase OS Acinetobacter calcoaceticus GN mro PE 1 SV 1
blastp_uniprot_sprot sp|P0A9C4|GALM_SHIFL 35 355 + 321 Gaps:14 92.77 346 33.33 3e-51 Aldose 1-epimerase OS Shigella flexneri GN galM PE 3 SV 1
blastp_uniprot_sprot sp|P0A9C3|GALM_ECOLI 35 355 + 321 Gaps:14 92.77 346 33.33 3e-51 Aldose 1-epimerase OS Escherichia coli (strain K12) GN galM PE 1 SV 1
blastp_uniprot_sprot sp|P21955|GALM_STRTR 46 359 + 314 Gaps:8 90.23 348 34.08 9e-50 Aldose 1-epimerase OS Streptococcus thermophilus GN galM PE 3 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 11 356 346 PTHR10091 none none none
SUPERFAMILY 21 356 336 SSF74650 none none IPR011013
Gene3D 23 357 335 G3DSA:2.70.98.10 none none IPR014718
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 17 21 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 22 362 341 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 4 16 13 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 31 354 324 PF01263 none Aldose 1-epimerase IPR008183
PANTHER 11 356 346 PTHR10091:SF3 none none none
PIRSF 17 358 342 PIRSF005096 "KEGG:00010+5.1.3.3","KEGG:00052+5.1.3.3","MetaCyc:PWY-2723","MetaCyc:PWY-6317","MetaCyc:PWY-6737","UniPathway:UPA00242" none IPR015443

1 Localization

Analysis Start End Length
SignalP_EUK 1 21 20

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 21   Secretory pathway 1 0.953 0.012 NON-PLANT 21