Protein : Qrob_P0216690.2 Q. robur
Protein Identifier  ? Qrob_P0216690.2 Organism . Name  Quercus robur
Score  89.0 Score Type  egn
Protein Description  (M=5) PTHR11453 - ANION EXCHANGE PROTEIN Gene Prediction Quality  validated
Protein length 

Sequence

Length: 714  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0005452 inorganic anion exchanger activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: inorganic anion A(out) + inorganic anion B(in) = inorganic anion A(in) + inorganic anion B(out).
GO:0006820 anion transport The directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0008s09970g 1 711 + 711 Gaps:5 99.72 712 88.59 0.0 POPTRDRAFT_803457 hypothetical protein
blastp_kegg lcl|pmum:103323241 1 711 + 711 none 99.72 713 88.05 0.0 probable boron transporter 2
blastp_kegg lcl|pper:PRUPE_ppa002139mg 1 711 + 711 Gaps:3 99.72 710 88.28 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_021453 1 711 + 711 none 99.72 713 89.45 0.0 HCO3- transporter family isoform 1
blastp_kegg lcl|mdm:103414536 1 711 + 711 Gaps:2 99.72 711 86.88 0.0 probable boron transporter 2
blastp_kegg lcl|mdm:103452651 1 711 + 711 Gaps:2 99.72 711 86.88 0.0 probable boron transporter 2
blastp_kegg lcl|pxb:103961247 1 711 + 711 Gaps:2 99.72 711 86.74 0.0 probable boron transporter 2
blastp_kegg lcl|mdm:103416235 1 711 + 711 Gaps:2 99.72 711 88.15 0.0 probable boron transporter 2
blastp_kegg lcl|fve:101293872 1 711 + 711 Gaps:2 99.72 715 85.69 0.0 probable boron transporter 2-like
blastp_kegg lcl|vvi:100252933 1 711 + 711 Gaps:6 98.89 721 86.26 0.0 boron transporter
blastp_uniprot_sprot sp|Q9M1P7|BOR2_ARATH 1 695 + 695 Gaps:10 97.72 703 80.49 0.0 Probable boron transporter 2 OS Arabidopsis thaliana GN BOR2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYR7|BOR1_ARATH 1 696 + 696 Gaps:10 97.73 704 80.67 0.0 Boron transporter 1 OS Arabidopsis thaliana GN BOR1 PE 1 SV 1
blastp_uniprot_sprot sp|Q93Z13|BOR3_ARATH 3 711 + 709 Gaps:27 99.18 732 73.42 0.0 Probable boron transporter 3 OS Arabidopsis thaliana GN BOR3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9XI23|BOR4_ARATH 8 645 + 638 Gaps:7 93.56 683 59.00 0.0 Boron transporter 4 OS Arabidopsis thaliana GN BOR4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SSG5|BOR5_ARATH 1 645 + 645 Gaps:14 95.31 683 56.99 0.0 Putative boron transporter 5 OS Arabidopsis thaliana GN BOR5 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SUU1|BOR7_ARATH 1 651 + 651 Gaps:29 98.07 673 55.76 0.0 Probable boron transporter 7 OS Arabidopsis thaliana GN BOR7 PE 2 SV 3
blastp_uniprot_sprot sp|Q3E954|BOR6_ARATH 7 651 + 645 Gaps:18 96.42 671 55.18 0.0 Probable boron transporter 6 OS Arabidopsis thaliana GN BOR6 PE 2 SV 2
blastp_uniprot_sprot sp|P53838|BOR1_YEAST 10 368 + 359 Gaps:23 59.72 576 31.10 8e-46 Boron transporter 1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN BOR1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9HGM6|YHW5_SCHPO 11 600 + 590 Gaps:99 94.97 517 27.49 2e-45 Putative transporter C543.05c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPBC543.05c PE 3 SV 1
blastp_uniprot_sprot sp|Q8JZR6|S4A8_MOUSE 1 600 + 600 Gaps:77 49.95 1089 27.94 1e-29 Electroneutral sodium bicarbonate exchanger 1 OS Mus musculus GN Slc4a8 PE 2 SV 1
rpsblast_cdd gnl|CDD|144522 1 551 + 551 Gaps:65 93.61 501 28.36 4e-35 pfam00955 HCO3_cotransp HCO3- transporter family. This family contains Band 3 anion exchange proteins that exchange CL-/HCO3-. This family also includes cotransporters of Na+/HCO3-.
rpsblast_cdd gnl|CDD|162058 4 603 + 600 Gaps:70 56.56 900 29.67 2e-33 TIGR00834 ae anion exchange protein. The Anion Exchanger (AE) Family (TC 2.A.31)Characterized protein members of the AE family are found only in animals.They preferentially catalyze anion exchange (antiport) reactions typically acting as HCO3-:Cl- antiporters but also transporting a range of other inorganic and organic anions. Additionally renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
rpsblast_kog gnl|CDD|36387 2 620 + 619 Gaps:32 62.21 876 40.37 1e-126 KOG1172 KOG1172 KOG1172 Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism].

29 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 581 713 133 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 110 120 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 196 215 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 311 330 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 443 645 203 PTHR11453 "Reactome:REACT_15518";signature_desc=ANION EXCHANGE PROTEIN none IPR003020
Pfam 200 370 171 PF00955 "Reactome:REACT_15518" HCO3- transporter family IPR011531
Pfam 3 179 177 PF00955 "Reactome:REACT_15518" HCO3- transporter family IPR011531
Pfam 460 550 91 PF00955 "Reactome:REACT_15518" HCO3- transporter family IPR011531
Phobius 216 234 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 32 52 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 370 370 PTHR11453 "Reactome:REACT_15518";signature_desc=ANION EXCHANGE PROTEIN none IPR003020
Phobius 53 63 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 143 153 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 31 31 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 18 59 42 G3DSA:1.10.287.570 none none none
PANTHER 443 645 203 PTHR11453:SF31 none none none
PANTHER 1 370 370 PTHR11453:SF31 none none none
Phobius 86 89 4 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 331 351 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 121 142 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 352 553 202 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 235 255 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 554 580 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 256 290 35 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 177 195 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 291 310 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 64 85 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 154 176 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 90 109 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

10 Localization

Analysis Start End Length
TMHMM 194 216 22
TMHMM 287 309 22
TMHMM 120 142 22
TMHMM 336 358 22
TMHMM 91 110 19
TMHMM 534 556 22
TMHMM 560 582 22
TMHMM 154 172 18
TMHMM 64 86 22
TMHMM 32 54 22

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting