Protein : Qrob_P0200570.2 Q. robur
Protein Identifier  ? Qrob_P0200570.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=34) K15032 - mTERF domain-containing protein, mitochondrial Gene Prediction Quality  validated
Protein length 

Sequence

Length: 403  
Kegg Orthology  K15032
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003690 double-stranded DNA binding Interacting selectively and non-covalently with double-stranded DNA.
GO:0005739 mitochondrion A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103332324 1 398 + 398 Gaps:5 100.00 393 64.38 2e-163 uncharacterized LOC103332324
blastp_kegg lcl|vvi:100268158 51 395 + 345 Gaps:1 88.66 388 65.70 1e-162 uncharacterized LOC100268158
blastp_kegg lcl|mdm:103409800 1 398 + 398 Gaps:5 99.49 395 62.09 4e-162 uncharacterized LOC103409800
blastp_kegg lcl|pxb:103967783 1 398 + 398 Gaps:5 99.49 395 60.81 3e-160 uncharacterized LOC103967783
blastp_kegg lcl|pper:PRUPE_ppa015928mg 1 379 + 379 Gaps:5 100.00 374 64.97 2e-156 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0169990 50 398 + 349 none 95.36 366 64.18 3e-156 hypothetical protein
blastp_kegg lcl|tcc:TCM_001222 1 394 + 394 Gaps:13 98.20 388 54.33 6e-131 Mitochondrial transcription termination factor family protein putative
blastp_kegg lcl|cit:102611177 50 397 + 348 Gaps:1 91.60 381 57.59 7e-131 uncharacterized LOC102611177
blastp_kegg lcl|cit:102615995 15 392 + 378 Gaps:18 88.30 812 56.49 1e-128 uncharacterized LOC102615995
blastp_kegg lcl|sly:101255083 24 395 + 372 none 94.90 392 51.08 1e-126 uncharacterized LOC101255083
rpsblast_cdd gnl|CDD|202273 86 367 + 282 Gaps:54 98.84 345 34.31 2e-21 pfam02536 mTERF mTERF. This family contains one sequence of known function Human mitochondrial transcription termination factor (mTERF) the rest of the family consists of hypothetical proteins none of which have any functional information. mTERF is a multizipper protein possessing three putative leucine zippers one of which is bipartite. The protein binds DNA as a monomer. The leucine zippers are not implicated in a dimerisation role as in other leucine zippers.
rpsblast_cdd gnl|CDD|178738 89 366 + 278 Gaps:48 48.46 487 23.73 3e-12 PLN03196 PLN03196 MOC1-like protein Provisional.
rpsblast_kog gnl|CDD|36481 2 383 + 382 Gaps:16 91.04 413 23.40 2e-25 KOG1267 KOG1267 KOG1267 Mitochondrial transcription termination factor mTERF [Transcription General function prediction only].

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 50 385 336 PTHR13068:SF15 none none none
SMART 214 244 31 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 248 278 31 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 315 346 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 139 170 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 283 314 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 178 209 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 103 134 32 SM00733 none Mitochondrial termination factor repeats IPR003690
Pfam 73 158 86 PF02536 none mTERF IPR003690
Pfam 177 367 191 PF02536 none mTERF IPR003690
PANTHER 50 385 336 PTHR13068 none none none

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 16   Mitochondrion 3 0.011 0.832 NON-PLANT 16