Protein : Qrob_P0198710.2 Q. robur
Protein Identifier  ? Qrob_P0198710.2 Organism . Name  Quercus robur
Score  58.0 Score Type  egn
Protein Description  (M=3) 4.2.3.105 - Tricyclene synthase. Code Enzyme  EC:4.2.3.105, EC:4.2.3.106
Gene Prediction Quality  validated Protein length 

Sequence

Length: 432  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0010333 terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100782452 7 430 + 424 Gaps:2 71.36 597 67.14 0.0 tricyclene synthase EBOS chloroplastic-like
blastp_kegg lcl|pxb:103946959 7 428 + 422 Gaps:2 77.37 548 66.04 0.0 tricyclene synthase EBOS chloroplastic-like
blastp_kegg lcl|pxb:103946958 7 428 + 422 Gaps:2 77.37 548 65.33 0.0 tricyclene synthase EBOS chloroplastic-like
blastp_kegg lcl|vvi:100243167 7 430 + 424 Gaps:2 70.88 601 64.32 0.0 (E)-beta-ocimene synthase
blastp_kegg lcl|gmx:100814880 7 430 + 424 Gaps:2 63.58 670 65.49 0.0 tricyclene synthase EBOS chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_011G107200g 7 430 + 424 Gaps:3 71.05 601 63.00 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0007s02920g 7 430 + 424 Gaps:1 72.65 585 61.88 0.0 POPTRDRAFT_763927 hypothetical protein
blastp_kegg lcl|vvi:100263737 7 430 + 424 Gaps:2 73.58 579 61.74 0.0 isoprene synthase chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0058130 7 431 + 425 Gaps:1 72.23 587 61.56 0.0 (R)-limonene synthase putative (EC:4.2.3.20)
blastp_kegg lcl|vvi:100265475 7 431 + 425 Gaps:6 71.59 602 61.72 0.0 isoprene synthase chloroplastic-like
blastp_pdb 3n0g_B 7 428 + 422 Gaps:1 76.22 555 57.45 0.0 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0g_A 7 428 + 422 Gaps:1 76.22 555 57.45 0.0 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_B 7 428 + 422 Gaps:1 76.22 555 57.45 0.0 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_A 7 428 + 422 Gaps:1 76.22 555 57.45 0.0 mol:protein length:555 Isoprene synthase
blastp_pdb 2onh_B 7 429 + 423 Gaps:3 78.45 543 42.49 2e-119 mol:protein length:543 4S-limonene synthase
blastp_pdb 2onh_A 7 429 + 423 Gaps:3 78.45 543 42.49 2e-119 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_B 7 429 + 423 Gaps:3 78.45 543 42.49 2e-119 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_A 7 429 + 423 Gaps:3 78.45 543 42.49 2e-119 mol:protein length:543 4S-limonene synthase
blastp_pdb 2j5c_B 5 410 + 406 Gaps:4 71.70 569 44.12 6e-119 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_pdb 2j5c_A 5 410 + 406 Gaps:4 71.70 569 44.12 6e-119 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_uniprot_sprot sp|Q672F7|TPS2_LOTJA 7 430 + 424 Gaps:1 71.43 595 64.71 0.0 Tricyclene synthase EBOS chloroplastic OS Lotus japonicus GN EBOS PE 1 SV 1
blastp_uniprot_sprot sp|Q5UB07|TPS4_MEDTR 5 429 + 425 Gaps:1 73.45 580 62.21 0.0 Tricyclene synthase TPS4 chloroplastic OS Medicago truncatula GN TPS4 PE 1 SV 1
blastp_uniprot_sprot sp|B9T825|TPS12_RICCO 7 431 + 425 Gaps:1 72.23 587 61.56 0.0 Probable terpene synthase 12 OS Ricinus communis GN TPS12 PE 3 SV 1
blastp_uniprot_sprot sp|Q7XAS7|ISPS_POPTM 7 428 + 422 Gaps:1 71.09 595 57.68 0.0 Isoprene synthase chloroplastic OS Populus tremuloides GN ISPS PE 3 SV 1
blastp_uniprot_sprot sp|Q50L36|ISPS_POPAL 7 428 + 422 Gaps:1 71.09 595 57.68 0.0 Isoprene synthase chloroplastic OS Populus alba GN ISPS PE 1 SV 1
blastp_uniprot_sprot sp|Q9AR86|ISPS_POPCN 7 428 + 422 Gaps:1 71.09 595 56.97 3e-179 Isoprene synthase chloroplastic OS Populus canescens GN ISPS PE 1 SV 1
blastp_uniprot_sprot sp|Q6EJ97|ISPS_PUEML 7 430 + 424 Gaps:6 70.72 608 56.28 5e-172 Isoprene synthase chloroplastic OS Pueraria montana var. lobata GN ISPS PE 1 SV 1
blastp_uniprot_sprot sp|B3TPQ7|ATESY_MAGGA 8 431 + 424 Gaps:2 71.62 592 54.72 8e-166 Alpha-terpineol synthase chloroplastic OS Magnolia grandiflora PE 1 SV 1
blastp_uniprot_sprot sp|Q6PWU2|ATESY_VITVI 7 428 + 422 Gaps:1 71.69 590 53.43 1e-164 (-)-alpha-terpineol synthase OS Vitis vinifera PE 1 SV 1
blastp_uniprot_sprot sp|Q93X23|MYRS_QUEIL 7 430 + 424 Gaps:1 71.19 597 52.00 4e-161 Myrcene synthase chloroplastic OS Quercus ilex PE 1 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 6 430 425 PTHR31225 none none none
Pfam 6 77 72 PF01397 none Terpene synthase, N-terminal domain IPR001906
PANTHER 6 430 425 PTHR31225:SF0 none none none
Gene3D 118 428 311 G3DSA:1.10.600.10 none none IPR008949
SUPERFAMILY 104 428 325 SSF48576 none none IPR008949
SUPERFAMILY 6 102 97 SSF48239 none none IPR008930
Gene3D 6 117 112 G3DSA:1.50.30.10 none none IPR001906
Pfam 107 375 269 PF03936 none Terpene synthase family, metal binding domain IPR005630

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting