Protein : Qrob_P0196300.2 Q. robur
Protein Identifier  ? Qrob_P0196300.2 Organism . Name  Quercus robur
Score  17.5 Score Type  egn
Protein Description  (M=2) PTHR31707:SF3 - PECTINESTERASE/PECTINESTERASE INHIBITOR 13-RELATED (PTHR31707:SF3) Code Enzyme  EC:3.1.1.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 594  
Kegg Orthology  K01051
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005618 cell wall The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
GO:0030599 pectinesterase activity Catalysis of the reaction: pectin + n H2O = n methanol + pectate.
GO:0042545 cell wall modification The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
GO:0004857 enzyme inhibitor activity Binds to and stops, prevents or reduces the activity of an enzyme.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100245002 1 592 + 592 Gaps:44 99.82 565 64.36 0.0 probable pectinesterase/pectinesterase inhibitor 21-like
blastp_kegg lcl|csv:101220540 1 592 + 592 Gaps:44 99.82 567 63.60 0.0 putative pectinesterase/pectinesterase inhibitor 28-like
blastp_kegg lcl|cmo:103503817 1 592 + 592 Gaps:44 99.82 567 63.43 0.0 pectinesterase-like
blastp_kegg lcl|vvi:100241799 1 592 + 592 Gaps:45 99.82 566 61.42 0.0 probable pectinesterase/pectinesterase inhibitor 21-like
blastp_kegg lcl|csv:101229198 32 592 + 561 Gaps:42 96.25 560 65.31 0.0 probable pectinesterase/pectinesterase inhibitor 21-like
blastp_kegg lcl|csv:101220071 32 592 + 561 Gaps:42 96.25 560 65.31 0.0 probable pectinesterase/pectinesterase inhibitor 21-like
blastp_kegg lcl|csv:101205469 30 592 + 563 Gaps:42 95.23 566 62.89 0.0 putative pectinesterase/pectinesterase inhibitor 28-like
blastp_kegg lcl|cmo:103503798 31 592 + 562 Gaps:41 95.06 567 62.52 0.0 pectinesterase-like
blastp_kegg lcl|csv:101231227 30 588 + 559 Gaps:42 91.77 583 62.99 0.0 putative pectinesterase/pectinesterase inhibitor 28-like
blastp_kegg lcl|vvi:100242515 3 592 + 590 Gaps:39 99.12 570 60.18 0.0 putative pectinesterase/pectinesterase inhibitor 28-like
blastp_pdb 1gq8_A 248 587 + 340 Gaps:30 97.81 319 52.24 4e-104 mol:protein length:319 PECTINESTERASE
blastp_pdb 1xg2_A 252 591 + 340 Gaps:30 98.42 317 50.00 2e-97 mol:protein length:317 Pectinesterase 1
blastp_pdb 2ntq_B 252 589 + 338 Gaps:68 98.83 342 31.36 2e-23 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntq_A 252 589 + 338 Gaps:68 98.83 342 31.36 2e-23 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_B 252 589 + 338 Gaps:68 98.83 342 31.36 2e-23 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_A 252 589 + 338 Gaps:68 98.83 342 31.36 2e-23 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_B 252 589 + 338 Gaps:68 98.83 342 31.36 2e-23 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_A 252 589 + 338 Gaps:68 98.83 342 31.36 2e-23 mol:protein length:342 Pectinesterase A
blastp_pdb 1qjv_B 252 589 + 338 Gaps:68 98.83 342 31.36 4e-23 mol:protein length:342 PECTIN METHYLESTERASE
blastp_pdb 1qjv_A 252 589 + 338 Gaps:68 98.83 342 31.36 4e-23 mol:protein length:342 PECTIN METHYLESTERASE
blastp_uniprot_sprot sp|Q3E8Z8|PME28_ARATH 7 591 + 585 Gaps:55 74.32 732 45.04 1e-154 Putative pectinesterase/pectinesterase inhibitor 28 OS Arabidopsis thaliana GN PME28 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GX86|PME21_ARATH 7 591 + 585 Gaps:44 82.06 669 43.72 2e-150 Probable pectinesterase/pectinesterase inhibitor 21 OS Arabidopsis thaliana GN PME21 PE 2 SV 2
blastp_uniprot_sprot sp|Q7Y201|PME13_ARATH 47 586 + 540 Gaps:48 81.43 614 46.00 3e-144 Probable pectinesterase/pectinesterase inhibitor 13 OS Arabidopsis thaliana GN PME13 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FJ21|PME58_ARATH 7 588 + 582 Gaps:48 96.32 571 42.55 1e-143 Probable pectinesterase/pectinesterase inhibitor 58 OS Arabidopsis thaliana GN PME58 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SMY6|PME45_ARATH 47 586 + 540 Gaps:53 83.58 609 45.19 3e-143 Putative pectinesterase/pectinesterase inhibitor 45 OS Arabidopsis thaliana GN PME45 PE 2 SV 1
blastp_uniprot_sprot sp|O80722|PME4_ARATH 1 586 + 586 Gaps:89 99.15 588 42.54 7e-136 Pectinesterase 4 OS Arabidopsis thaliana GN PME4 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GXA1|PME23_ARATH 30 587 + 558 Gaps:45 93.84 568 41.09 5e-132 Probable pectinesterase/pectinesterase inhibitor 23 OS Arabidopsis thaliana GN PME23 PE 2 SV 3
blastp_uniprot_sprot sp|P83948|PME3_CITSI 18 587 + 570 Gaps:55 92.64 584 41.96 3e-131 Pectinesterase 3 OS Citrus sinensis PE 1 SV 1
blastp_uniprot_sprot sp|Q5MFV6|PME37_ARATH 2 586 + 585 Gaps:76 98.81 588 40.79 1e-129 Probable pectinesterase/pectinesterase inhibitor VGDH2 OS Arabidopsis thaliana GN VGDH2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SG77|PME24_ARATH 6 591 + 586 Gaps:63 95.37 561 43.93 1e-129 Putative pectinesterase/pectinesterase inhibitor 24 OS Arabidopsis thaliana GN PME24 PE 3 SV 1

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 45 202 158 G3DSA:1.20.140.40 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
Pfam 46 198 153 PF04043 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
Gene3D 249 588 340 G3DSA:2.160.20.10 none none IPR012334
SMART 44 198 155 SM00856 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 363 593 231 PTHR31707:SF3 none none none
PANTHER 1 333 333 PTHR31707:SF3 none none none
Phobius 1 4 4 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 252 334 83 PF01095 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase IPR000070
Pfam 361 577 217 PF01095 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase IPR000070
PANTHER 1 333 333 PTHR31707 none none none
SUPERFAMILY 47 202 156 SSF101148 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
Phobius 17 21 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SUPERFAMILY 363 588 226 SSF51126 none none IPR011050
SUPERFAMILY 249 333 85 SSF51126 none none IPR011050
Phobius 5 16 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
ProSitePatterns 425 434 10 PS00503 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 2. IPR018040
Phobius 22 593 572 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 363 593 231 PTHR31707 none none none
TIGRFAM 33 202 170 TIGR01614 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" PME_inhib: pectinesterase inhibitor domain IPR006501

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 21 20
SignalP_EUK 1 21 20
TMHMM 5 27 22

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 21   Secretory pathway 1 0.948 0.035 NON-PLANT 21