Protein : Qrob_P0195240.2 Q. robur
Protein Identifier  ? Qrob_P0195240.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=17) 4.2.3.15 - Myrcene synthase. Code Enzyme  EC:4.2.3.15
Gene Prediction Quality  validated Protein length 

Sequence

Length: 627  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0010333 terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100261705 1 608 + 608 Gaps:23 99.83 590 62.14 0.0 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100266404 1 607 + 607 Gaps:28 99.15 590 61.71 0.0 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100232956 1 607 + 607 Gaps:26 99.15 590 61.03 0.0 (-)-a-terpineol synthase (EC:4.2.3.111)
blastp_kegg lcl|vvi:100263483 1 608 + 608 Gaps:40 92.93 849 59.19 0.0 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100254181 2 607 + 606 Gaps:35 98.45 582 62.65 0.0 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100250958 1 612 + 612 Gaps:28 99.33 594 60.68 0.0 myrcene synthase chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0766900 46 608 + 563 Gaps:18 100.00 551 62.79 0.0 (R)-limonene synthase putative (EC:4.2.3.20)
blastp_kegg lcl|vvi:100259297 1 612 + 612 Gaps:28 99.33 594 60.51 0.0 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100246333 1 608 + 608 Gaps:27 99.83 596 59.16 0.0 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100248079 1 608 + 608 Gaps:24 99.83 593 58.11 0.0 myrcene synthase chloroplastic-like
blastp_pdb 2onh_B 58 606 + 549 Gaps:23 99.82 543 49.08 3e-177 mol:protein length:543 4S-limonene synthase
blastp_pdb 2onh_A 58 606 + 549 Gaps:23 99.82 543 49.08 3e-177 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_B 58 606 + 549 Gaps:23 99.82 543 49.08 3e-177 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_A 58 606 + 549 Gaps:23 99.82 543 49.08 3e-177 mol:protein length:543 4S-limonene synthase
blastp_pdb 3n0g_B 58 606 + 549 Gaps:16 96.76 555 48.42 2e-174 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0g_A 58 606 + 549 Gaps:16 96.76 555 48.42 2e-174 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_B 58 606 + 549 Gaps:16 96.76 555 48.42 2e-174 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_A 58 606 + 549 Gaps:16 96.76 555 48.42 2e-174 mol:protein length:555 Isoprene synthase
blastp_pdb 2j5c_B 60 588 + 529 Gaps:22 90.51 569 50.68 5e-174 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_pdb 2j5c_A 60 588 + 529 Gaps:22 90.51 569 50.68 5e-174 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_uniprot_sprot sp|Q93X23|MYRS_QUEIL 1 611 + 611 Gaps:22 100.00 597 69.18 0.0 Myrcene synthase chloroplastic OS Quercus ilex PE 1 SV 1
blastp_uniprot_sprot sp|Q6PWU2|ATESY_VITVI 1 607 + 607 Gaps:26 99.15 590 61.03 0.0 (-)-alpha-terpineol synthase OS Vitis vinifera PE 1 SV 1
blastp_uniprot_sprot sp|B9T536|TPS10_RICCO 46 608 + 563 Gaps:18 100.00 551 62.79 0.0 Terpene synthase 10 OS Ricinus communis GN TPS10 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L5K4|GTPS_CITLI 1 607 + 607 Gaps:49 100.00 600 58.00 0.0 Gamma-terpinene synthase chloroplastic OS Citrus limon PE 1 SV 1
blastp_uniprot_sprot sp|B3TPQ7|ATESY_MAGGA 30 608 + 579 Gaps:19 95.27 592 54.79 0.0 Alpha-terpineol synthase chloroplastic OS Magnolia grandiflora PE 1 SV 1
blastp_uniprot_sprot sp|Q8L5K3|RLC1_CITLI 12 608 + 597 Gaps:25 97.03 606 52.04 0.0 (R)-limonene synthase 1 OS Citrus limon PE 2 SV 1
blastp_uniprot_sprot sp|A7IZZ1|TPS1_CANSA 31 608 + 578 Gaps:30 92.60 622 51.04 0.0 (-)-limonene synthase chloroplastic OS Cannabis sativa GN TPS1 PE 1 SV 1
blastp_uniprot_sprot sp|A7IZZ2|TPS2_CANSA 29 608 + 580 Gaps:25 93.82 615 50.78 0.0 (+)-alpha-pinene synthase chloroplastic OS Cannabis sativa PE 1 SV 1
blastp_uniprot_sprot sp|G1JUH1|TPS3_SOLLC 10 608 + 599 Gaps:38 97.69 607 47.55 0.0 (-)-camphene/tricyclene synthase chloroplastic OS Solanum lycopersicum GN TPS3 PE 1 SV 1
blastp_uniprot_sprot sp|Q2XSC4|LABER_LAVAN 58 605 + 548 Gaps:18 98.88 538 49.25 0.0 Exo-alpha-bergamotene synthase OS Lavandula angustifolia PE 1 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 86 295 210 G3DSA:1.50.30.10 none none IPR001906
PANTHER 53 608 556 PTHR31225:SF0 none none none
Pfam 69 170 102 PF01397 none Terpene synthase, N-terminal domain IPR001906
Pfam 183 255 73 PF01397 none Terpene synthase, N-terminal domain IPR001906
PANTHER 53 608 556 PTHR31225 none none none
SUPERFAMILY 68 280 213 SSF48239 none none IPR008930
Pfam 285 553 269 PF03936 none Terpene synthase family, metal binding domain IPR005630
Gene3D 296 607 312 G3DSA:1.10.600.10 none none IPR008949
SUPERFAMILY 282 608 327 SSF48576 none none IPR008949

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting