Protein : Qrob_P0195190.2 Q. robur
Protein Identifier  ? Qrob_P0195190.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=17) 4.2.3.15 - Myrcene synthase. Code Enzyme  EC:4.2.3.15
Gene Prediction Quality  validated Protein length 

Sequence

Length: 275  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0010333 terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100854956 2 270 + 269 Gaps:114 67.19 570 43.60 6e-92 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100250958 2 274 + 273 Gaps:147 70.71 594 39.76 1e-85 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100261705 2 271 + 270 Gaps:147 70.68 590 40.05 1e-83 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100263483 2 271 + 270 Gaps:147 49.12 849 39.33 4e-81 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100254181 2 270 + 269 Gaps:147 71.48 582 38.70 5e-80 myrcene synthase chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0766900 2 271 + 270 Gaps:148 75.86 551 39.23 3e-78 (R)-limonene synthase putative (EC:4.2.3.20)
blastp_kegg lcl|vvi:100259297 2 274 + 273 Gaps:147 70.71 594 38.57 2e-77 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100266404 2 270 + 269 Gaps:147 70.51 590 38.46 6e-77 myrcene synthase chloroplastic-like
blastp_kegg lcl|vvi:100232956 2 270 + 269 Gaps:147 70.51 590 39.18 6e-77 (-)-a-terpineol synthase (EC:4.2.3.111)
blastp_kegg lcl|cmo:103499663 2 272 + 271 Gaps:148 70.18 597 38.42 1e-76 terpene synthase 10-like
blastp_pdb 1n24_B 6 268 + 263 Gaps:151 75.41 549 30.19 2e-51 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n24_A 6 268 + 263 Gaps:151 75.41 549 30.19 2e-51 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n23_B 6 268 + 263 Gaps:151 75.41 549 30.19 2e-51 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n23_A 6 268 + 263 Gaps:151 75.41 549 30.19 2e-51 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n22_B 6 268 + 263 Gaps:151 75.41 549 30.19 2e-51 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n22_A 6 268 + 263 Gaps:151 75.41 549 30.19 2e-51 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n21_A 6 268 + 263 Gaps:151 75.41 549 30.19 2e-51 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n20_B 6 268 + 263 Gaps:151 75.41 549 30.19 2e-51 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n20_A 6 268 + 263 Gaps:151 75.41 549 30.19 2e-51 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n1z_B 6 268 + 263 Gaps:151 75.41 549 30.19 2e-51 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_uniprot_sprot sp|Q93X23|MYRS_QUEIL 2 274 + 273 Gaps:147 70.35 597 41.43 2e-95 Myrcene synthase chloroplastic OS Quercus ilex PE 1 SV 1
blastp_uniprot_sprot sp|B9T536|TPS10_RICCO 2 271 + 270 Gaps:148 75.86 551 39.23 1e-79 Terpene synthase 10 OS Ricinus communis GN TPS10 PE 2 SV 1
blastp_uniprot_sprot sp|Q6PWU2|ATESY_VITVI 2 270 + 269 Gaps:147 70.51 590 39.18 2e-78 (-)-alpha-terpineol synthase OS Vitis vinifera PE 1 SV 1
blastp_uniprot_sprot sp|B3TPQ7|ATESY_MAGGA 2 271 + 270 Gaps:148 70.27 592 35.34 1e-65 Alpha-terpineol synthase chloroplastic OS Magnolia grandiflora PE 1 SV 1
blastp_uniprot_sprot sp|Q8L5K4|GTPS_CITLI 2 270 + 269 Gaps:157 70.67 600 34.43 2e-60 Gamma-terpinene synthase chloroplastic OS Citrus limon PE 1 SV 1
blastp_uniprot_sprot sp|Q672F7|TPS2_LOTJA 2 274 + 273 Gaps:147 70.59 595 32.14 2e-54 Tricyclene synthase EBOS chloroplastic OS Lotus japonicus GN EBOS PE 1 SV 1
blastp_uniprot_sprot sp|G1JUH1|TPS3_SOLLC 2 271 + 270 Gaps:154 69.85 607 29.72 4e-51 (-)-camphene/tricyclene synthase chloroplastic OS Solanum lycopersicum GN TPS3 PE 1 SV 1
blastp_uniprot_sprot sp|O81192|BPPS_SALOF 6 268 + 263 Gaps:151 69.23 598 30.19 9e-51 (+)-bornyl diphosphate synthase chloroplastic OS Salvia officinalis PE 1 SV 1
blastp_uniprot_sprot sp|Q5UB07|TPS4_MEDTR 4 269 + 266 Gaps:147 71.21 580 30.51 2e-49 Tricyclene synthase TPS4 chloroplastic OS Medicago truncatula GN TPS4 PE 1 SV 1
blastp_uniprot_sprot sp|B9RPM3|TPS9_RICCO 2 269 + 268 Gaps:148 70.89 584 29.47 7e-49 Probable terpene synthase 9 OS Ricinus communis GN TPS9 PE 3 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 2 65 64 G3DSA:1.50.30.10 none none IPR001906
SUPERFAMILY 62 271 210 SSF48576 none none IPR008949
PANTHER 2 271 270 PTHR31225 none none none
PANTHER 2 271 270 PTHR31225:SF0 none none none
Gene3D 99 172 74 G3DSA:1.10.600.10 none none IPR008949
Gene3D 66 98 33 G3DSA:1.10.600.10 none none IPR008949
Gene3D 173 270 98 G3DSA:1.10.600.10 none none IPR008949
SUPERFAMILY 2 64 63 SSF48239 none none IPR008930
Pfam 62 99 38 PF03936 none Terpene synthase family, metal binding domain IPR005630
Pfam 108 171 64 PF03936 none Terpene synthase family, metal binding domain IPR005630
Pfam 171 216 46 PF03936 none Terpene synthase family, metal binding domain IPR005630

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting