Protein : Qrob_P0188080.2 Q. robur
Protein Identifier  ? Qrob_P0188080.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=89) 3.1.1.11 - Pectinesterase. Code Enzyme  EC:3.1.1.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 569  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005618 cell wall The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
GO:0030599 pectinesterase activity Catalysis of the reaction: pectin + n H2O = n methanol + pectate.
GO:0042545 cell wall modification The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
GO:0004857 enzyme inhibitor activity Binds to and stops, prevents or reduces the activity of an enzyme.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103931480 1 568 + 568 Gaps:8 100.00 572 67.83 0.0 putative pectinesterase/pectinesterase inhibitor 24
blastp_kegg lcl|pxb:103931477 1 568 + 568 Gaps:8 100.00 572 67.83 0.0 putative pectinesterase/pectinesterase inhibitor 24
blastp_kegg lcl|mdm:103420524 1 568 + 568 Gaps:8 100.00 572 67.83 0.0 putative pectinesterase/pectinesterase inhibitor 24
blastp_kegg lcl|pper:PRUPE_ppa024156mg 1 568 + 568 Gaps:16 100.00 574 68.12 0.0 hypothetical protein
blastp_kegg lcl|pmum:103331047 1 568 + 568 Gaps:16 100.00 574 68.64 0.0 probable pectinesterase/pectinesterase inhibitor 46
blastp_kegg lcl|mdm:103438652 1 568 + 568 Gaps:8 100.00 572 67.66 0.0 putative pectinesterase/pectinesterase inhibitor 24
blastp_kegg lcl|pop:POPTR_0010s25380g 1 568 + 568 Gaps:9 100.00 569 67.31 0.0 POPTRDRAFT_567840 pectinesterase family protein
blastp_kegg lcl|gmx:100808802 1 564 + 564 Gaps:14 99.31 580 64.41 0.0 putative pectinesterase/pectinesterase inhibitor 24-like
blastp_kegg lcl|pvu:PHAVU_005G012000g 1 568 + 568 Gaps:4 100.00 570 63.33 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1542240 1 568 + 568 Gaps:9 100.00 573 67.89 0.0 Pectinesterase-3 precursor putative (EC:3.1.1.11)
blastp_pdb 1gq8_A 262 568 + 307 Gaps:5 97.81 319 52.56 7e-108 mol:protein length:319 PECTINESTERASE
blastp_pdb 1xg2_A 261 568 + 308 Gaps:5 98.74 317 50.80 7e-103 mol:protein length:317 Pectinesterase 1
blastp_pdb 2ntq_B 262 528 + 267 Gaps:56 91.52 342 27.80 8e-17 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntq_A 262 528 + 267 Gaps:56 91.52 342 27.80 8e-17 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_B 262 528 + 267 Gaps:56 91.52 342 27.80 8e-17 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_A 262 528 + 267 Gaps:56 91.52 342 27.80 8e-17 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_B 262 528 + 267 Gaps:56 91.52 342 27.80 8e-17 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_A 262 528 + 267 Gaps:56 91.52 342 27.80 8e-17 mol:protein length:342 Pectinesterase A
blastp_pdb 1qjv_B 262 528 + 267 Gaps:56 91.52 342 27.80 8e-17 mol:protein length:342 PECTIN METHYLESTERASE
blastp_pdb 1qjv_A 262 528 + 267 Gaps:56 91.52 342 27.80 8e-17 mol:protein length:342 PECTIN METHYLESTERASE
blastp_uniprot_sprot sp|Q9FF78|PME46_ARATH 6 565 + 560 Gaps:17 99.11 564 56.71 0.0 Probable pectinesterase/pectinesterase inhibitor 46 OS Arabidopsis thaliana GN PME46 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SG77|PME24_ARATH 7 568 + 562 Gaps:19 99.29 561 55.12 0.0 Putative pectinesterase/pectinesterase inhibitor 24 OS Arabidopsis thaliana GN PME24 PE 3 SV 1
blastp_uniprot_sprot sp|Q43111|PME3_PHAVU 1 557 + 557 Gaps:36 97.59 581 50.44 3e-177 Pectinesterase 3 OS Phaseolus vulgaris GN MPE3 PE 2 SV 1
blastp_uniprot_sprot sp|Q43867|PME1_ARATH 1 560 + 560 Gaps:44 98.29 586 46.35 9e-156 Pectinesterase 1 OS Arabidopsis thaliana GN PME1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GX86|PME21_ARATH 6 568 + 563 Gaps:37 84.30 669 40.43 3e-139 Probable pectinesterase/pectinesterase inhibitor 21 OS Arabidopsis thaliana GN PME21 PE 2 SV 2
blastp_uniprot_sprot sp|Q3E8Z8|PME28_ARATH 23 568 + 546 Gaps:26 75.41 732 40.22 7e-138 Putative pectinesterase/pectinesterase inhibitor 28 OS Arabidopsis thaliana GN PME28 PE 2 SV 1
blastp_uniprot_sprot sp|Q43143|PMEU1_SOLLC 23 568 + 546 Gaps:30 97.43 583 40.67 2e-135 Pectinesterase/pectinesterase inhibitor U1 OS Solanum lycopersicum GN PMEU1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FJ21|PME58_ARATH 18 564 + 547 Gaps:33 98.77 571 39.89 1e-132 Probable pectinesterase/pectinesterase inhibitor 58 OS Arabidopsis thaliana GN PME58 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUL8|PME26_ARATH 5 566 + 562 Gaps:92 96.90 968 41.26 7e-132 Putative pectinesterase/pectinesterase inhibitor 26 OS Arabidopsis thaliana GN PME26 PE 2 SV 1
blastp_uniprot_sprot sp|Q43062|PME_PRUPE 82 564 + 483 Gaps:33 92.34 522 45.85 2e-128 Pectinesterase/pectinesterase inhibitor PPE8B OS Prunus persica PE 2 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 20 568 549 PTHR31707:SF1 none none none
SUPERFAMILY 67 216 150 SSF101148 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
Gene3D 66 218 153 G3DSA:1.20.140.40 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
Phobius 28 47 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 27 27 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 48 568 521 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 260 566 307 SSF51126 none none IPR011050
Gene3D 260 566 307 G3DSA:2.160.20.10 none none IPR012334
Pfam 262 554 293 PF01095 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase IPR000070
SMART 63 215 153 SM00856 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
ProSitePatterns 406 415 10 PS00503 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 2. IPR018040
TIGRFAM 35 219 185 TIGR01614 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" PME_inhib: pectinesterase inhibitor domain IPR006501
Pfam 65 215 151 PF04043 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
PANTHER 20 568 549 PTHR31707 none none none

1 Localization

Analysis Start End Length
TMHMM 30 49 19

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting