Protein : Qrob_P0186410.2 Q. robur
Protein Identifier  ? Qrob_P0186410.2 Organism . Name  Quercus robur
Score  88.1 Score Type  egn
Protein Description  (M=1) 4.2.1.24 - Porphobilinogen synthase. Code Enzyme  EC:4.2.1.24
Gene Prediction Quality  validated Protein length 

Sequence

Length: 434  
Kegg Orthology  K01698
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0004655 porphobilinogen synthase activity Catalysis of the reaction: 2 5-aminolevulinate = 2 H(2)O + H(+) + porphobilinogen.
GO:0033014 tetrapyrrole biosynthetic process The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1030560 1 433 + 433 Gaps:65 87.50 432 85.45 0.0 porphobilinogen synthase putative (EC:4.2.1.24)
blastp_kegg lcl|tcc:TCM_035142 1 433 + 433 Gaps:63 87.44 430 83.78 0.0 Aldolase superfamily protein isoform 1
blastp_kegg lcl|pop:POPTR_0002s08280g 1 433 + 433 Gaps:67 87.44 430 86.17 0.0 POPTRDRAFT_551443 Delta-aminolevulinic acid dehydratase family protein
blastp_kegg lcl|cmo:103485385 1 433 + 433 Gaps:63 87.44 430 85.37 0.0 delta-aminolevulinic acid dehydratase chloroplastic
blastp_kegg lcl|cit:102608887 1 433 + 433 Gaps:65 87.38 428 83.69 0.0 delta-aminolevulinic acid dehydratase 1 chloroplastic-like
blastp_kegg lcl|csv:101222312 1 433 + 433 Gaps:63 87.44 430 84.57 0.0 CSALAD delta-aminolevulinic acid dehydratase chloroplastic-like
blastp_kegg lcl|aly:ARALYDRAFT_339208 10 433 + 424 Gaps:62 84.65 430 82.42 0.0 hypothetical protein
blastp_kegg lcl|ath:AT1G69740 10 433 + 424 Gaps:62 84.65 430 82.14 0.0 HEMB1 putative delta-aminolevulinic acid dehydratase
blastp_kegg lcl|vvi:100264314 1 433 + 433 Gaps:63 87.44 430 82.45 0.0 delta-aminolevulinic acid dehydratase chloroplastic-like
blastp_kegg lcl|pda:103698125 3 433 + 431 Gaps:64 86.21 428 76.96 0.0 delta-aminolevulinic acid dehydratase chloroplastic-like
blastp_pdb 3obk_H 100 433 + 334 Gaps:63 77.25 356 56.73 5e-85 mol:protein length:356 Delta-aminolevulinic acid dehydratase
blastp_pdb 3obk_G 100 433 + 334 Gaps:63 77.25 356 56.73 5e-85 mol:protein length:356 Delta-aminolevulinic acid dehydratase
blastp_pdb 3obk_F 100 433 + 334 Gaps:63 77.25 356 56.73 5e-85 mol:protein length:356 Delta-aminolevulinic acid dehydratase
blastp_pdb 3obk_E 100 433 + 334 Gaps:63 77.25 356 56.73 5e-85 mol:protein length:356 Delta-aminolevulinic acid dehydratase
blastp_pdb 3obk_D 100 433 + 334 Gaps:63 77.25 356 56.73 5e-85 mol:protein length:356 Delta-aminolevulinic acid dehydratase
blastp_pdb 3obk_C 100 433 + 334 Gaps:63 77.25 356 56.73 5e-85 mol:protein length:356 Delta-aminolevulinic acid dehydratase
blastp_pdb 3obk_B 100 433 + 334 Gaps:63 77.25 356 56.73 5e-85 mol:protein length:356 Delta-aminolevulinic acid dehydratase
blastp_pdb 3obk_A 100 433 + 334 Gaps:63 77.25 356 56.73 5e-85 mol:protein length:356 Delta-aminolevulinic acid dehydratase
blastp_pdb 2c1h_B 101 433 + 333 Gaps:65 82.32 328 52.22 5e-69 mol:protein length:328 DELTA-AMINOLEVULINIC ACID DEHYDRATASE
blastp_pdb 2c1h_A 101 433 + 333 Gaps:65 82.32 328 52.22 5e-69 mol:protein length:328 DELTA-AMINOLEVULINIC ACID DEHYDRATASE
blastp_uniprot_sprot sp|Q9SFH9|HEM21_ARATH 10 433 + 424 Gaps:62 84.65 430 82.14 0.0 Delta-aminolevulinic acid dehydratase 1 chloroplastic OS Arabidopsis thaliana GN HEMB1 PE 2 SV 1
blastp_uniprot_sprot sp|P43210|HEM2_SOYBN 1 433 + 433 Gaps:81 86.89 412 84.92 0.0 Delta-aminolevulinic acid dehydratase chloroplastic OS Glycine max GN HEMB PE 1 SV 1
blastp_uniprot_sprot sp|P24493|HEM2_SPIOL 41 433 + 393 Gaps:62 76.91 433 82.88 4e-176 Delta-aminolevulinic acid dehydratase chloroplastic OS Spinacia oleracea GN HEMB PE 1 SV 2
blastp_uniprot_sprot sp|P30124|HEM2_PEA 20 433 + 414 Gaps:74 85.93 398 83.92 1e-175 Delta-aminolevulinic acid dehydratase chloroplastic (Fragment) OS Pisum sativum GN HEMB PE 1 SV 1
blastp_uniprot_sprot sp|Q5Z8V9|HEM2_ORYSJ 1 433 + 433 Gaps:70 87.09 426 73.32 2e-174 Delta-aminolevulinic acid dehydratase chloroplastic OS Oryza sativa subsp. japonica GN HEMB PE 2 SV 1
blastp_uniprot_sprot sp|Q42836|HEM2_HORVU 1 433 + 433 Gaps:73 86.92 428 72.58 2e-173 Delta-aminolevulinic acid dehydratase chloroplastic OS Hordeum vulgare GN HEMB PE 2 SV 1
blastp_uniprot_sprot sp|P45623|HEM2_SELMA 67 433 + 367 Gaps:60 73.62 417 78.83 8e-158 Delta-aminolevulinic acid dehydratase chloroplastic OS Selaginella martensii GN HEMB PE 3 SV 1
blastp_uniprot_sprot sp|Q43058|HEM2_PHYPA 67 433 + 367 Gaps:61 71.16 430 79.08 2e-144 Delta-aminolevulinic acid dehydratase chloroplastic OS Physcomitrella patens subsp. patens GN HEMB PE 2 SV 1
blastp_uniprot_sprot sp|Q94LA4|HEM22_ARATH 76 433 + 358 Gaps:69 71.18 406 71.28 2e-129 Probable delta-aminolevulinic acid dehydratase 2 chloroplastic OS Arabidopsis thaliana GN HEMB2 PE 1 SV 1
blastp_uniprot_sprot sp|Q42682|HEM2_CHLRE 86 433 + 348 Gaps:69 76.15 390 61.62 2e-106 Delta-aminolevulinic acid dehydratase chloroplastic OS Chlamydomonas reinhardtii GN HEMB PE 1 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 186 377 192 G3DSA:3.20.20.70 none none IPR013785
Gene3D 100 156 57 G3DSA:3.20.20.70 none none IPR013785
Gene3D 406 433 28 G3DSA:3.20.20.70 none none IPR013785
SMART 100 433 334 SM01004 "KEGG:00860+4.2.1.24","MetaCyc:PWY-5188","MetaCyc:PWY-5189","UniPathway:UPA00251" Delta-aminolevulinic acid dehydratase IPR001731
SUPERFAMILY 406 433 28 SSF51569 none none none
SUPERFAMILY 97 379 283 SSF51569 none none none
PANTHER 65 161 97 PTHR11458 "KEGG:00860+4.2.1.24","MetaCyc:PWY-5188","MetaCyc:PWY-5189","UniPathway:UPA00251";signature_desc=PORPHOBILINOGEN SYNTHASE none IPR001731
PANTHER 407 433 27 PTHR11458 "KEGG:00860+4.2.1.24","MetaCyc:PWY-5188","MetaCyc:PWY-5189","UniPathway:UPA00251";signature_desc=PORPHOBILINOGEN SYNTHASE none IPR001731
PANTHER 187 371 185 PTHR11458 "KEGG:00860+4.2.1.24","MetaCyc:PWY-5188","MetaCyc:PWY-5189","UniPathway:UPA00251";signature_desc=PORPHOBILINOGEN SYNTHASE none IPR001731
Pfam 406 433 28 PF00490 "KEGG:00860+4.2.1.24","MetaCyc:PWY-5188","MetaCyc:PWY-5189","UniPathway:UPA00251" Delta-aminolevulinic acid dehydratase IPR001731
Pfam 186 377 192 PF00490 "KEGG:00860+4.2.1.24","MetaCyc:PWY-5188","MetaCyc:PWY-5189","UniPathway:UPA00251" Delta-aminolevulinic acid dehydratase IPR001731
Pfam 102 155 54 PF00490 "KEGG:00860+4.2.1.24","MetaCyc:PWY-5188","MetaCyc:PWY-5189","UniPathway:UPA00251" Delta-aminolevulinic acid dehydratase IPR001731
PRINTS 245 259 15 PR00144 "KEGG:00860+4.2.1.24","MetaCyc:PWY-5188","MetaCyc:PWY-5189","UniPathway:UPA00251" Delta-aminolevulinic acid dehydratase signature IPR001731
PRINTS 314 333 20 PR00144 "KEGG:00860+4.2.1.24","MetaCyc:PWY-5188","MetaCyc:PWY-5189","UniPathway:UPA00251" Delta-aminolevulinic acid dehydratase signature IPR001731
PRINTS 276 295 20 PR00144 "KEGG:00860+4.2.1.24","MetaCyc:PWY-5188","MetaCyc:PWY-5189","UniPathway:UPA00251" Delta-aminolevulinic acid dehydratase signature IPR001731
PRINTS 366 382 17 PR00144 "KEGG:00860+4.2.1.24","MetaCyc:PWY-5188","MetaCyc:PWY-5189","UniPathway:UPA00251" Delta-aminolevulinic acid dehydratase signature IPR001731

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting