Protein : Qrob_P0166060.2 Q. robur
Protein Identifier  ? Qrob_P0166060.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=10) PTHR31080:SF2 - F23N19.14-RELATED (PTHR31080:SF2) Code Enzyme  EC:3.1.1.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 208  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0030599 pectinesterase activity Catalysis of the reaction: pectin + n H2O = n methanol + pectate.
GO:0004857 enzyme inhibitor activity Binds to and stops, prevents or reduces the activity of an enzyme.

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa011478mg 1 207 + 207 Gaps:3 100.00 208 52.40 2e-56 hypothetical protein
blastp_kegg lcl|pxb:103959872 1 205 + 205 Gaps:4 99.52 208 49.76 4e-56 21 kDa protein-like
blastp_kegg lcl|mdm:103440934 1 207 + 207 Gaps:7 100.00 208 50.48 6e-55 21 kDa protein
blastp_kegg lcl|pmum:103333339 1 207 + 207 Gaps:3 100.00 208 51.44 6e-55 21 kDa protein-like
blastp_kegg lcl|pop:POPTR_0012s14570g 28 207 + 180 Gaps:6 87.13 202 52.27 1e-54 POPTRDRAFT_570589 invertase/pectin methylesterase inhibitor family protein
blastp_kegg lcl|pxb:103961999 1 205 + 205 Gaps:7 99.51 205 50.49 3e-54 21 kDa protein-like
blastp_kegg lcl|pop:POPTR_0015s14660g 1 207 + 207 Gaps:7 100.00 208 49.04 2e-52 POPTRDRAFT_776567 hypothetical protein
blastp_kegg lcl|fve:101312980 45 207 + 163 Gaps:1 84.82 191 50.00 8e-51 21 kDa protein-like
blastp_kegg lcl|pop:POPTR_0015s14620g 35 207 + 173 Gaps:2 95.58 181 50.29 2e-50 POPTRDRAFT_776571 hypothetical protein
blastp_kegg lcl|tcc:TCM_014951 1 207 + 207 Gaps:7 100.00 210 46.19 6e-50 Plant invertase/pectin methylesterase inhibitor superfamily protein putative
blastp_uniprot_sprot sp|P17407|21KD_DAUCA 48 205 + 158 Gaps:4 82.90 193 43.12 9e-42 21 kDa protein OS Daucus carota PE 2 SV 1
blastp_uniprot_sprot sp|O04886|PME1_CITSI 37 205 + 169 Gaps:4 29.28 584 24.56 2e-14 Pectinesterase 1 OS Citrus sinensis GN PECS-1.1 PE 2 SV 1
blastp_uniprot_sprot sp|P83948|PME3_CITSI 37 205 + 169 Gaps:4 29.28 584 24.56 2e-14 Pectinesterase 3 OS Citrus sinensis PE 1 SV 1
blastp_uniprot_sprot sp|Q42534|PME2_ARATH 39 205 + 167 Gaps:3 28.62 587 26.19 1e-13 Pectinesterase 2 OS Arabidopsis thaliana GN PME2 PE 2 SV 2
blastp_uniprot_sprot sp|Q43867|PME1_ARATH 44 202 + 159 Gaps:16 28.16 586 28.48 2e-10 Pectinesterase 1 OS Arabidopsis thaliana GN PME1 PE 2 SV 1
blastp_uniprot_sprot sp|O49006|PME3_ARATH 49 205 + 157 Gaps:13 26.69 592 25.95 4e-10 Pectinesterase/pectinesterase inhibitor 3 OS Arabidopsis thaliana GN PME3 PE 2 SV 2
blastp_uniprot_sprot sp|Q43143|PMEU1_SOLLC 49 202 + 154 Gaps:9 26.93 583 26.11 1e-09 Pectinesterase/pectinesterase inhibitor U1 OS Solanum lycopersicum GN PMEU1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUL8|PME26_ARATH 40 202 + 163 Gaps:26 33.78 968 28.44 7e-09 Putative pectinesterase/pectinesterase inhibitor 26 OS Arabidopsis thaliana GN PME26 PE 2 SV 1
blastp_uniprot_sprot sp|Q3E8Z8|PME28_ARATH 49 202 + 154 Gaps:13 20.36 732 28.86 1e-07 Putative pectinesterase/pectinesterase inhibitor 28 OS Arabidopsis thaliana GN PME28 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FK05|PME61_ARATH 49 204 + 156 Gaps:10 25.89 587 26.32 4e-07 Probable pectinesterase/pectinesterase inhibitor 61 OS Arabidopsis thaliana GN PME61 PE 1 SV 1
rpsblast_cdd gnl|CDD|197924 43 201 + 159 Gaps:11 100.00 148 36.49 2e-25 smart00856 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex. It has been implicated in the regulation of fruit development carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein. It is also found at the N-termini of PMEs predicted from DNA sequences suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical.
rpsblast_cdd gnl|CDD|162447 15 205 + 191 Gaps:17 97.75 178 29.31 6e-22 TIGR01614 PME_inhib pectinesterase inhibitor domain. This model describes a plant domain of about 200 amino acids characterized by four conserved Cys residues shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this HMM followed immediately by a pectinesterase domain pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.
rpsblast_cdd gnl|CDD|202862 46 201 + 156 Gaps:11 100.00 145 32.41 8e-22 pfam04043 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex. It has been implicated in the regulation of fruit development carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein. It is also found at the N-termini of PMEs predicted from DNA sequences (personal obs:C Yeats) suggesting that both PMEs and their inhibitor are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical.
rpsblast_cdd gnl|CDD|178087 47 202 + 156 Gaps:9 26.37 565 32.89 9e-16 PLN02468 PLN02468 putative pectinesterase/pectinesterase inhibitor.
rpsblast_cdd gnl|CDD|177948 36 202 + 167 Gaps:14 29.18 586 28.07 1e-15 PLN02314 PLN02314 pectinesterase.
rpsblast_cdd gnl|CDD|178122 19 201 + 183 Gaps:12 33.71 537 26.52 1e-14 PLN02506 PLN02506 putative pectinesterase/pectinesterase inhibitor.
rpsblast_cdd gnl|CDD|177947 39 205 + 167 Gaps:11 28.62 587 27.38 5e-13 PLN02313 PLN02313 Pectinesterase/pectinesterase inhibitor.
rpsblast_cdd gnl|CDD|178346 49 205 + 157 Gaps:15 25.17 596 28.00 3e-12 PLN02745 PLN02745 Putative pectinesterase/pectinesterase inhibitor.
rpsblast_cdd gnl|CDD|178102 49 204 + 156 Gaps:12 25.55 587 28.67 5e-12 PLN02484 PLN02484 probable pectinesterase/pectinesterase inhibitor.
rpsblast_cdd gnl|CDD|178037 13 202 + 190 Gaps:12 34.01 541 25.00 2e-09 PLN02416 PLN02416 probable pectinesterase/pectinesterase inhibitor.

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 46 201 156 PF04043 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
Gene3D 46 205 160 G3DSA:1.20.140.40 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
SMART 44 201 158 SM00856 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
Phobius 36 207 172 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 15 15 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 16 27 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 35 35 SIGNAL_PEPTIDE none Signal peptide region none
TIGRFAM 21 205 185 TIGR01614 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" PME_inhib: pectinesterase inhibitor domain IPR006501
SUPERFAMILY 47 204 158 SSF101148 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
PANTHER 15 205 191 PTHR31080 none none none
Phobius 28 35 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 15 205 191 PTHR31080:SF2 none none none

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 35 34
TMHMM 15 37 22
SignalP_EUK 1 35 34

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 35   Secretory pathway 2 0.931 0.007 NON-PLANT 35