Protein : Qrob_P0166050.2 Q. robur
Protein Identifier  ? Qrob_P0166050.2 Organism . Name  Quercus robur
Score  94.3 Score Type  egn
Protein Description  (M=10) PTHR31080:SF2 - F23N19.14-RELATED (PTHR31080:SF2) Code Enzyme  EC:3.1.1.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 203  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0030599 pectinesterase activity Catalysis of the reaction: pectin + n H2O = n methanol + pectate.
GO:0004857 enzyme inhibitor activity Binds to and stops, prevents or reduces the activity of an enzyme.

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa011478mg 28 201 + 174 Gaps:3 84.13 208 57.14 3e-57 hypothetical protein
blastp_kegg lcl|pmum:103333339 28 201 + 174 Gaps:3 84.13 208 56.57 1e-56 21 kDa protein-like
blastp_kegg lcl|fve:101312980 42 202 + 161 none 84.29 191 54.66 3e-54 21 kDa protein-like
blastp_kegg lcl|mdm:103440934 35 201 + 167 Gaps:2 81.25 208 55.03 3e-51 21 kDa protein
blastp_kegg lcl|gmx:100527443 40 199 + 160 none 70.18 228 52.50 1e-50 uncharacterized LOC100527443
blastp_kegg lcl|pxb:103959872 11 202 + 192 Gaps:4 94.23 208 51.02 4e-50 21 kDa protein-like
blastp_kegg lcl|pop:POPTR_0012s14570g 38 202 + 165 none 81.68 202 53.94 5e-50 POPTRDRAFT_570589 invertase/pectin methylesterase inhibitor family protein
blastp_kegg lcl|vvi:100265520 45 202 + 158 Gaps:1 75.36 211 50.94 5e-49 21 kDa protein-like
blastp_kegg lcl|pxb:103961999 11 202 + 192 Gaps:7 94.15 205 51.81 8e-48 21 kDa protein-like
blastp_kegg lcl|rcu:RCOM_1500020 22 201 + 180 Gaps:3 88.83 206 51.37 1e-45 21 kDa protein precursor putative
blastp_uniprot_sprot sp|P17407|21KD_DAUCA 45 201 + 157 Gaps:3 82.90 193 41.25 1e-36 21 kDa protein OS Daucus carota PE 2 SV 1
blastp_uniprot_sprot sp|O04886|PME1_CITSI 38 201 + 164 Gaps:3 28.60 584 27.54 1e-16 Pectinesterase 1 OS Citrus sinensis GN PECS-1.1 PE 2 SV 1
blastp_uniprot_sprot sp|P83948|PME3_CITSI 38 201 + 164 Gaps:3 28.60 584 27.54 1e-16 Pectinesterase 3 OS Citrus sinensis PE 1 SV 1
blastp_uniprot_sprot sp|Q43143|PMEU1_SOLLC 44 198 + 155 Gaps:14 27.27 583 30.82 3e-13 Pectinesterase/pectinesterase inhibitor U1 OS Solanum lycopersicum GN PMEU1 PE 2 SV 1
blastp_uniprot_sprot sp|O49006|PME3_ARATH 44 201 + 158 Gaps:2 27.03 592 26.25 6e-13 Pectinesterase/pectinesterase inhibitor 3 OS Arabidopsis thaliana GN PME3 PE 2 SV 2
blastp_uniprot_sprot sp|Q42534|PME2_ARATH 44 201 + 158 Gaps:6 27.26 587 28.12 2e-12 Pectinesterase 2 OS Arabidopsis thaliana GN PME2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FK05|PME61_ARATH 46 198 + 153 Gaps:5 25.55 587 29.33 2e-11 Probable pectinesterase/pectinesterase inhibitor 61 OS Arabidopsis thaliana GN PME61 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LUL8|PME26_ARATH 39 198 + 160 Gaps:20 34.09 968 27.27 2e-09 Putative pectinesterase/pectinesterase inhibitor 26 OS Arabidopsis thaliana GN PME26 PE 2 SV 1
blastp_uniprot_sprot sp|Q43867|PME1_ARATH 50 201 + 152 Gaps:21 27.13 586 27.67 3e-09 Pectinesterase 1 OS Arabidopsis thaliana GN PME1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M3B0|PME34_ARATH 46 200 + 155 Gaps:16 24.92 598 29.53 9e-09 Probable pectinesterase/pectinesterase inhibitor 34 OS Arabidopsis thaliana GN PME34 PE 2 SV 1
rpsblast_cdd gnl|CDD|197924 44 197 + 154 Gaps:10 97.30 148 37.50 9e-26 smart00856 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex. It has been implicated in the regulation of fruit development carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein. It is also found at the N-termini of PMEs predicted from DNA sequences suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical.
rpsblast_cdd gnl|CDD|202862 45 197 + 153 Gaps:10 98.62 145 30.07 2e-21 pfam04043 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex. It has been implicated in the regulation of fruit development carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein. It is also found at the N-termini of PMEs predicted from DNA sequences (personal obs:C Yeats) suggesting that both PMEs and their inhibitor are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical.
rpsblast_cdd gnl|CDD|162447 16 201 + 186 Gaps:11 98.31 178 31.43 3e-19 TIGR01614 PME_inhib pectinesterase inhibitor domain. This model describes a plant domain of about 200 amino acids characterized by four conserved Cys residues shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this HMM followed immediately by a pectinesterase domain pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.
rpsblast_cdd gnl|CDD|178102 46 202 + 157 Gaps:5 25.89 587 30.92 2e-16 PLN02484 PLN02484 probable pectinesterase/pectinesterase inhibitor.
rpsblast_cdd gnl|CDD|177948 14 201 + 188 Gaps:23 34.98 586 25.37 4e-16 PLN02314 PLN02314 pectinesterase.
rpsblast_cdd gnl|CDD|177947 21 201 + 181 Gaps:15 32.71 587 26.56 3e-15 PLN02313 PLN02313 Pectinesterase/pectinesterase inhibitor.
rpsblast_cdd gnl|CDD|178122 16 202 + 187 Gaps:17 35.38 537 28.95 4e-15 PLN02506 PLN02506 putative pectinesterase/pectinesterase inhibitor.
rpsblast_cdd gnl|CDD|178087 50 198 + 149 Gaps:8 25.31 565 30.77 2e-14 PLN02468 PLN02468 putative pectinesterase/pectinesterase inhibitor.
rpsblast_cdd gnl|CDD|178346 46 201 + 156 Gaps:14 25.17 596 30.00 6e-11 PLN02745 PLN02745 Putative pectinesterase/pectinesterase inhibitor.
rpsblast_cdd gnl|CDD|178037 14 198 + 185 Gaps:7 33.27 541 27.22 7e-10 PLN02416 PLN02416 probable pectinesterase/pectinesterase inhibitor.

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 45 201 157 SSF101148 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
Gene3D 45 201 157 G3DSA:1.20.140.40 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
Phobius 34 202 169 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 45 197 153 PF04043 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
Phobius 19 28 10 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 29 33 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 5 201 197 PTHR31080 none none none
TIGRFAM 19 201 183 TIGR01614 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" PME_inhib: pectinesterase inhibitor domain IPR006501
SMART 41 197 157 SM00856 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
Phobius 1 33 33 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 5 201 197 PTHR31080:SF2 none none none
Phobius 1 18 18 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none

2 Localization

Analysis Start End Length
TMHMM 10 32 22
SignalP_EUK 1 33 32

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 33   Secretory pathway 1 0.911 0.026 NON-PLANT 33