Protein : Qrob_P0157660.2 Q. robur
Protein Identifier  ? Qrob_P0157660.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=21) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED (PTHR11206:SF87) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 251  
Kegg Orthology  K03327
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006855 drug transmembrane transport The process in which a drug is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
GO:0015238 drug transmembrane transporter activity Enables the directed movement of a drug from one side of a membrane to the other. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
GO:0015297 antiporter activity Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.

28 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103319348 1 249 + 249 Gaps:5 53.33 465 64.92 3e-103 MATE efflux family protein 7-like
blastp_kegg lcl|pxb:103928209 1 248 + 248 Gaps:5 53.12 465 64.37 6e-103 MATE efflux family protein 5-like
blastp_kegg lcl|cit:102617575 1 249 + 249 Gaps:4 52.89 467 64.37 4e-99 MATE efflux family protein 5-like
blastp_kegg lcl|tcc:TCM_036271 1 249 + 249 Gaps:5 47.42 523 63.31 6e-97 MATE efflux family protein putative
blastp_kegg lcl|pop:POPTR_0019s10450g 39 248 + 210 Gaps:1 51.72 408 72.04 8e-94 hypothetical protein
blastp_kegg lcl|sot:102605555 4 249 + 246 Gaps:6 51.48 474 61.89 7e-91 MATE efflux family protein 9-like
blastp_kegg lcl|sly:101265879 4 249 + 246 Gaps:6 51.48 474 60.66 3e-90 MATE efflux family protein 9-like
blastp_kegg lcl|rcu:RCOM_0742760 22 241 + 220 Gaps:4 96.04 227 65.60 4e-90 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa015054mg 41 249 + 209 Gaps:2 51.21 412 66.82 2e-88 hypothetical protein
blastp_kegg lcl|pop:POPTR_0229s00260g 8 249 + 242 Gaps:4 62.66 383 58.75 4e-88 hypothetical protein
blastp_pdb 3mku_B 2 229 + 228 Gaps:15 50.22 460 24.24 4e-06 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mku_A 2 229 + 228 Gaps:15 50.22 460 24.24 4e-06 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mkt_B 2 229 + 228 Gaps:15 50.22 460 24.24 4e-06 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mkt_A 2 229 + 228 Gaps:15 50.22 460 24.24 4e-06 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_uniprot_sprot sp|Q9SIA1|MATE8_ARATH 5 248 + 244 Gaps:4 50.73 477 49.17 6e-72 MATE efflux family protein 8 OS Arabidopsis thaliana GN DTXL4 PE 3 SV 2
blastp_uniprot_sprot sp|Q8RWF5|MATE9_ARATH 8 248 + 241 Gaps:4 49.48 483 49.79 2e-71 MATE efflux family protein 9 OS Arabidopsis thaliana GN DTXL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA5|DTX1_ARATH 11 249 + 239 Gaps:4 49.79 476 49.37 2e-69 MATE efflux family protein DTX1 OS Arabidopsis thaliana GN DTX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GXM8|MATE7_ARATH 11 249 + 239 Gaps:4 49.79 476 48.10 1e-66 MATE efflux family protein 7 OS Arabidopsis thaliana GN DTXL3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA3|MATE6_ARATH 11 249 + 239 Gaps:4 49.79 476 49.37 6e-66 MATE efflux family protein 6 OS Arabidopsis thaliana GN DTXL2 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SIA4|MATE5_ARATH 11 249 + 239 Gaps:4 49.79 476 49.37 4e-63 MATE efflux family protein 5 OS Arabidopsis thaliana GN DTXL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LUH2|ALF5_ARATH 9 249 + 241 Gaps:6 50.10 477 35.56 2e-35 MATE efflux family protein ALF5 OS Arabidopsis thaliana GN ALF5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUH3|LAL5_ARATH 9 249 + 241 Gaps:4 50.96 469 34.73 4e-34 MATE efflux family protein LAL5 OS Arabidopsis thaliana GN LAL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LYT3|TT12_ARATH 9 249 + 241 Gaps:4 47.14 507 32.64 4e-29 Protein TRANSPARENT TESTA 12 OS Arabidopsis thaliana GN TT12 PE 2 SV 1
blastp_uniprot_sprot sp|A4IIS8|S47A1_XENTR 29 249 + 221 Gaps:1 38.68 574 29.28 6e-21 Multidrug and toxin extrusion protein 1 OS Xenopus tropicalis GN slc47a1 PE 2 SV 1
rpsblast_cdd gnl|CDD|162043 21 249 + 229 Gaps:8 66.96 342 24.45 4e-21 TIGR00797 matE putative efflux protein MATE family. The Multi Antimicrobial Extrusion (MATE) Family (TC 2.A.66) The MATE family consists of probable efflux proteins including a functionally characterized multi drug efflux system from Vibrio parahaemolyticus a putative ethionine resistance protein of Saccharomyces cerevisiae and the functionally uncharacterized DNA damage-inducible protein F (DinF) of E. coli. These proteins have 12 probable TMS.
rpsblast_cdd gnl|CDD|190033 21 183 + 163 Gaps:6 100.00 161 27.33 2e-17 pfam01554 MatE MatE. The MatE domain.
rpsblast_cdd gnl|CDD|30880 8 248 + 241 Gaps:9 53.19 455 21.07 6e-14 COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms].
rpsblast_kog gnl|CDD|36561 7 249 + 243 Gaps:6 50.53 473 40.17 6e-50 KOG1347 KOG1347 KOG1347 Uncharacterized membrane protein predicted efflux pump [General function prediction only].

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 162 185 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 151 161 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 117 127 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 128 150 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 191 213 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 12 33 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 53 75 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 186 190 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 21 182 162 PF01554 "Reactome:REACT_15518","Reactome:REACT_20633" MatE IPR002528
Phobius 1 11 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 95 116 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 214 250 37 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 76 94 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 2 249 248 PTHR11206:SF87 none none none
PANTHER 2 249 248 PTHR11206 none none none
Phobius 34 52 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

6 Localization

Analysis Start End Length
TMHMM 54 76 22
TMHMM 95 117 22
TMHMM 161 180 19
TMHMM 195 214 19
TMHMM 12 34 22
TMHMM 132 154 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran_2000_2002_QTL4_Delta.F Qrob_Chr09 9 s_1C1GRV_1289 v_12080_1202 2.56 0 13,73 lod 7.4808 0.051
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL4_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BOL3D_361 2.56 0 12,57 lod 6.9263 0.028

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 34   Secretory pathway 2 0.928 0.016 NON-PLANT 34