Protein : Qrob_P0154000.2 Q. robur
Protein Identifier  ? Qrob_P0154000.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=50) K01051 - pectinesterase [EC:3.1.1.11] Code Enzyme  EC:3.1.1.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 481  
Kegg Orthology  K01051
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005618 cell wall The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
GO:0030599 pectinesterase activity Catalysis of the reaction: pectin + n H2O = n methanol + pectate.
GO:0042545 cell wall modification The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
GO:0004857 enzyme inhibitor activity Binds to and stops, prevents or reduces the activity of an enzyme.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100255703 6 478 + 473 Gaps:10 93.76 513 77.55 0.0 pectinesterase 2-like
blastp_kegg lcl|tcc:TCM_005543 6 478 + 473 Gaps:9 92.84 517 74.79 0.0 Pectinesterase 2
blastp_kegg lcl|vvi:100259777 23 478 + 456 Gaps:9 90.25 513 75.16 0.0 pectinesterase 2-like
blastp_kegg lcl|vvi:100242757 23 478 + 456 Gaps:9 90.43 512 75.38 0.0 pectinesterase 2-like
blastp_kegg lcl|pop:POPTR_0014s06260g 1 478 + 478 Gaps:11 93.97 514 72.88 0.0 POPTRDRAFT_572081 putative pectin methylesterase LuPME1 family protein
blastp_kegg lcl|vvi:100263290 23 478 + 456 Gaps:9 90.43 512 75.16 0.0 pectinesterase 2-like
blastp_kegg lcl|cic:CICLE_v10019773mg 1 478 + 478 Gaps:9 93.92 510 72.44 0.0 hypothetical protein
blastp_kegg lcl|cit:102577945 1 478 + 478 Gaps:9 93.92 510 72.44 0.0 PECS-2.1 pectinesterase (EC:3.1.1.11)
blastp_kegg lcl|gmx:100781697 9 478 + 470 Gaps:12 93.28 506 74.15 0.0 pectinesterase 2-like
blastp_kegg lcl|gmx:100819641 1 478 + 478 Gaps:13 93.74 511 73.28 0.0 pectinesterase 2-like
blastp_pdb 1gq8_A 194 478 + 285 Gaps:4 89.97 319 60.98 3e-118 mol:protein length:319 PECTINESTERASE
blastp_pdb 1xg2_A 199 478 + 280 Gaps:4 88.96 317 59.22 1e-112 mol:protein length:317 Pectinesterase 1
blastp_pdb 1qjv_B 200 444 + 245 Gaps:51 81.87 342 34.64 1e-27 mol:protein length:342 PECTIN METHYLESTERASE
blastp_pdb 1qjv_A 200 444 + 245 Gaps:51 81.87 342 34.64 1e-27 mol:protein length:342 PECTIN METHYLESTERASE
blastp_pdb 2ntq_B 200 444 + 245 Gaps:51 81.87 342 34.64 2e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntq_A 200 444 + 245 Gaps:51 81.87 342 34.64 2e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_B 200 444 + 245 Gaps:51 81.87 342 34.64 2e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_A 200 444 + 245 Gaps:51 81.87 342 34.64 2e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_B 200 444 + 245 Gaps:51 81.87 342 34.64 2e-27 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_A 200 444 + 245 Gaps:51 81.87 342 34.64 2e-27 mol:protein length:342 Pectinesterase A
blastp_uniprot_sprot sp|O04887|PME2_CITSI 1 478 + 478 Gaps:9 93.92 510 72.23 0.0 Pectinesterase 2 OS Citrus sinensis GN PECS-2.1 PE 2 SV 1
blastp_uniprot_sprot sp|O22149|PME17_ARATH 1 477 + 477 Gaps:12 93.74 511 68.06 0.0 Probable pectinesterase/pectinesterase inhibitor 17 OS Arabidopsis thaliana GN PME17 PE 2 SV 2
blastp_uniprot_sprot sp|O81320|PME38_ARATH 30 478 + 449 Gaps:29 92.41 474 54.79 1e-156 Putative pectinesterase/pectinesterase inhibitor 38 OS Arabidopsis thaliana GN PME38 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FHN5|PME59_ARATH 27 477 + 451 Gaps:29 88.06 536 50.21 5e-153 Probable pectinesterase/pectinesterase inhibitor 59 OS Arabidopsis thaliana GN PME59 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FHN4|PME60_ARATH 27 478 + 452 Gaps:25 87.59 540 49.89 1e-149 Probable pectinesterase/pectinesterase inhibitor 60 OS Arabidopsis thaliana GN PME60 PE 2 SV 1
blastp_uniprot_sprot sp|Q9STY3|PME33_ARATH 17 478 + 462 Gaps:29 82.66 594 48.27 8e-147 Probable pectinesterase/pectinesterase inhibitor 33 OS Arabidopsis thaliana GN PME33 PE 2 SV 1
blastp_uniprot_sprot sp|P83948|PME3_CITSI 25 478 + 454 Gaps:44 83.56 584 46.93 2e-135 Pectinesterase 3 OS Citrus sinensis PE 1 SV 1
blastp_uniprot_sprot sp|O04886|PME1_CITSI 25 478 + 454 Gaps:44 83.56 584 47.75 1e-133 Pectinesterase 1 OS Citrus sinensis GN PECS-1.1 PE 2 SV 1
blastp_uniprot_sprot sp|Q43143|PMEU1_SOLLC 19 478 + 460 Gaps:40 85.08 583 44.35 4e-132 Pectinesterase/pectinesterase inhibitor U1 OS Solanum lycopersicum GN PMEU1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M3B0|PME34_ARATH 24 477 + 454 Gaps:47 80.43 598 47.19 1e-128 Probable pectinesterase/pectinesterase inhibitor 34 OS Arabidopsis thaliana GN PME34 PE 2 SV 1

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 343 352 10 PS00503 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 2. IPR018040
TIGRFAM 4 168 165 TIGR01614 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" PME_inhib: pectinesterase inhibitor domain IPR006501
Gene3D 25 167 143 G3DSA:1.20.140.40 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
SUPERFAMILY 27 168 142 SSF101148 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
Phobius 5 16 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 195 476 282 G3DSA:2.160.20.10 none none IPR012334
Phobius 25 480 456 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SMART 23 165 143 SM00856 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
Pfam 24 165 142 PF04043 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
Phobius 1 4 4 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 17 478 462 PTHR31707:SF1 none none none
Pfam 200 478 279 PF01095 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase IPR000070
Phobius 1 24 24 SIGNAL_PEPTIDE none Signal peptide region none
ProSitePatterns 226 245 20 PS00800 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 1. IPR018040
PANTHER 17 478 462 PTHR31707 none none none
SUPERFAMILY 194 477 284 SSF51126 none none IPR011050
Phobius 17 24 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none

3 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 26 25
SignalP_GRAM_POSITIVE 1 26 25
SignalP_EUK 1 24 23

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 22   Secretory pathway 1 0.939 0.071 NON-PLANT 22