Protein : Qrob_P0153990.2 Q. robur
Protein Identifier  ? Qrob_P0153990.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=50) K01051 - pectinesterase [EC:3.1.1.11] Code Enzyme  EC:3.1.1.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 515  
Kegg Orthology  K01051
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005618 cell wall The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
GO:0030599 pectinesterase activity Catalysis of the reaction: pectin + n H2O = n methanol + pectate.
GO:0042545 cell wall modification The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
GO:0004857 enzyme inhibitor activity Binds to and stops, prevents or reduces the activity of an enzyme.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100255703 6 514 + 509 Gaps:5 99.81 513 80.47 0.0 pectinesterase 2-like
blastp_kegg lcl|tcc:TCM_005543 6 514 + 509 Gaps:4 98.84 517 77.10 0.0 Pectinesterase 2
blastp_kegg lcl|vvi:100259777 22 514 + 493 Gaps:4 96.49 513 77.98 0.0 pectinesterase 2-like
blastp_kegg lcl|pop:POPTR_0014s06260g 1 514 + 514 Gaps:6 100.00 514 76.26 0.0 POPTRDRAFT_572081 putative pectin methylesterase LuPME1 family protein
blastp_kegg lcl|vvi:100242757 23 514 + 492 Gaps:4 96.48 512 77.94 0.0 pectinesterase 2-like
blastp_kegg lcl|vvi:100263290 23 514 + 492 Gaps:4 96.48 512 77.13 0.0 pectinesterase 2-like
blastp_kegg lcl|cic:CICLE_v10019773mg 1 514 + 514 Gaps:4 100.00 510 74.51 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1611040 17 514 + 498 Gaps:6 96.89 514 76.91 0.0 Pectinesterase-2 precursor putative (EC:3.1.1.11)
blastp_kegg lcl|cit:102577945 1 514 + 514 Gaps:4 100.00 510 74.51 0.0 PECS-2.1 pectinesterase (EC:3.1.1.11)
blastp_kegg lcl|pop:POPTR_0002s14640g 1 514 + 514 Gaps:6 100.00 514 74.51 0.0 POPTRDRAFT_552027 putative pectin methylesterase LuPME1 family protein
blastp_pdb 1gq8_A 199 514 + 316 Gaps:4 99.69 319 62.58 1e-135 mol:protein length:319 PECTINESTERASE
blastp_pdb 1xg2_A 204 514 + 311 Gaps:4 98.74 317 61.34 2e-130 mol:protein length:317 Pectinesterase 1
blastp_pdb 2ntq_B 205 504 + 300 Gaps:69 97.95 342 34.63 2e-28 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntq_A 205 504 + 300 Gaps:69 97.95 342 34.63 2e-28 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_B 205 504 + 300 Gaps:69 97.95 342 34.63 2e-28 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_A 205 504 + 300 Gaps:69 97.95 342 34.63 2e-28 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_B 205 504 + 300 Gaps:69 97.95 342 34.63 2e-28 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_A 205 504 + 300 Gaps:69 97.95 342 34.63 2e-28 mol:protein length:342 Pectinesterase A
blastp_pdb 1qjv_B 205 504 + 300 Gaps:69 97.95 342 34.63 2e-28 mol:protein length:342 PECTIN METHYLESTERASE
blastp_pdb 1qjv_A 205 504 + 300 Gaps:69 97.95 342 34.63 2e-28 mol:protein length:342 PECTIN METHYLESTERASE
blastp_uniprot_sprot sp|O04887|PME2_CITSI 1 514 + 514 Gaps:4 100.00 510 74.31 0.0 Pectinesterase 2 OS Citrus sinensis GN PECS-2.1 PE 2 SV 1
blastp_uniprot_sprot sp|O22149|PME17_ARATH 1 514 + 514 Gaps:8 99.80 511 69.41 0.0 Probable pectinesterase/pectinesterase inhibitor 17 OS Arabidopsis thaliana GN PME17 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FHN5|PME59_ARATH 31 514 + 484 Gaps:24 93.28 536 51.20 6e-172 Probable pectinesterase/pectinesterase inhibitor 59 OS Arabidopsis thaliana GN PME59 PE 2 SV 1
blastp_uniprot_sprot sp|Q9STY3|PME33_ARATH 17 514 + 498 Gaps:26 87.88 594 50.00 5e-171 Probable pectinesterase/pectinesterase inhibitor 33 OS Arabidopsis thaliana GN PME33 PE 2 SV 1
blastp_uniprot_sprot sp|O81320|PME38_ARATH 30 514 + 485 Gaps:24 98.95 474 54.58 2e-169 Putative pectinesterase/pectinesterase inhibitor 38 OS Arabidopsis thaliana GN PME38 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FHN4|PME60_ARATH 19 514 + 496 Gaps:22 94.81 540 50.78 4e-168 Probable pectinesterase/pectinesterase inhibitor 60 OS Arabidopsis thaliana GN PME60 PE 2 SV 1
blastp_uniprot_sprot sp|P83948|PME3_CITSI 25 514 + 490 Gaps:41 88.87 584 48.17 4e-152 Pectinesterase 3 OS Citrus sinensis PE 1 SV 1
blastp_uniprot_sprot sp|O04886|PME1_CITSI 25 514 + 490 Gaps:41 88.87 584 48.94 4e-150 Pectinesterase 1 OS Citrus sinensis GN PECS-1.1 PE 2 SV 1
blastp_uniprot_sprot sp|P83947|PME1_FICPW 9 514 + 506 Gaps:34 95.78 545 47.51 8e-150 Pectinesterase/pectinesterase inhibitor OS Ficus pumila var. awkeotsang PE 1 SV 1
blastp_uniprot_sprot sp|P09607|PME21_SOLLC 6 514 + 509 Gaps:32 95.09 550 48.57 1e-148 Pectinesterase 2.1 OS Solanum lycopersicum GN PME2.1 PE 2 SV 2

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 231 250 20 PS00800 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 1. IPR018040
PANTHER 24 514 491 PTHR31707 none none none
Phobius 17 22 6 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 205 499 295 PF01095 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase IPR000070
Phobius 23 514 492 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 4 4 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 24 514 491 PTHR31707:SF1 none none none
ProSitePatterns 348 357 10 PS00503 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 2. IPR018040
SUPERFAMILY 27 173 147 SSF101148 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
TIGRFAM 3 173 171 TIGR01614 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" PME_inhib: pectinesterase inhibitor domain IPR006501
Phobius 5 16 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 25 172 148 G3DSA:1.20.140.40 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
SUPERFAMILY 199 513 315 SSF51126 none none IPR011050
Phobius 1 22 22 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 25 170 146 PF04043 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
SMART 23 170 148 SM00856 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
Gene3D 200 513 314 G3DSA:2.160.20.10 none none IPR012334

2 Localization

Analysis Start End Length
SignalP_EUK 1 22 21
SignalP_GRAM_POSITIVE 1 26 25

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 22   Secretory pathway 1 0.953 0.033 NON-PLANT 22