Protein : Qrob_P0147540.2 Q. robur
Protein Identifier  ? Qrob_P0147540.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=10) PTHR11945:SF141 - MYOCYTE-SPECIFIC ENHANCER FACTOR 2 (PTHR11945:SF141) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 218  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0046983 protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0101370 12 178 + 167 Gaps:6 78.80 217 51.46 2e-49 mads box protein putative
blastp_kegg lcl|mdm:103407015 12 190 + 179 Gaps:17 82.05 234 44.79 1e-41 agamous-like MADS-box protein AGL62
blastp_kegg lcl|pmum:103331557 12 190 + 179 Gaps:15 82.05 234 45.31 1e-41 agamous-like MADS-box protein AGL62
blastp_kegg lcl|tcc:TCM_006325 12 202 + 191 Gaps:7 88.07 218 44.79 2e-41 Mads box protein putative
blastp_kegg lcl|gmx:100782074 12 178 + 167 Gaps:7 94.80 173 46.95 6e-41 agamous-like MADS-box protein AGL61-like
blastp_kegg lcl|cit:102622305 9 211 + 203 Gaps:12 85.65 237 45.32 1e-40 agamous-like MADS-box protein AGL62-like
blastp_kegg lcl|sly:101252236 12 178 + 167 Gaps:18 75.59 213 49.69 1e-40 agamous-like MADS-box protein AGL62-like
blastp_kegg lcl|pper:PRUPE_ppa024464mg 12 190 + 179 Gaps:11 81.74 230 43.62 1e-40 hypothetical protein
blastp_kegg lcl|cmo:103498214 12 176 + 165 Gaps:9 73.58 212 47.44 4e-40 agamous-like MADS-box protein AGL62
blastp_kegg lcl|cmo:103497390 12 176 + 165 Gaps:10 83.78 185 47.10 6e-40 agamous-like MADS-box protein AGL62
blastp_pdb 1mnm_B 17 80 + 64 none 64.00 100 45.31 2e-12 mol:protein length:100 PROTEIN (MCM1 TRANSCRIPTIONAL REGULATOR)
blastp_pdb 1mnm_A 17 80 + 64 none 64.00 100 45.31 2e-12 mol:protein length:100 PROTEIN (MCM1 TRANSCRIPTIONAL REGULATOR)
blastp_pdb 3p57_J 16 96 + 81 none 90.00 90 33.33 1e-11 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3p57_I 16 96 + 81 none 90.00 90 33.33 1e-11 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3p57_D 16 96 + 81 none 90.00 90 33.33 1e-11 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3p57_C 16 96 + 81 none 90.00 90 33.33 1e-11 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3p57_B 16 96 + 81 none 90.00 90 33.33 1e-11 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3p57_A 16 96 + 81 none 90.00 90 33.33 1e-11 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3kov_J 16 96 + 81 none 90.00 90 33.33 1e-11 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3kov_I 16 96 + 81 none 90.00 90 33.33 1e-11 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_uniprot_sprot sp|Q4PSU4|AGL61_ARATH 14 201 + 188 Gaps:15 76.14 264 38.31 1e-35 Agamous-like MADS-box protein AGL61 OS Arabidopsis thaliana GN AGL61 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FKK2|AGL62_ARATH 12 176 + 165 Gaps:9 56.19 299 38.69 3e-33 Agamous-like MADS-box protein AGL62 OS Arabidopsis thaliana GN AGL62 PE 1 SV 1
blastp_uniprot_sprot sp|Q6VAM4|MAD23_ORYSJ 15 108 + 94 Gaps:15 68.55 159 43.12 2e-19 MADS-box transcription factor 23 OS Oryza sativa subsp. japonica GN MADS23 PE 2 SV 1
blastp_uniprot_sprot sp|Q43585|AG_TOBAC 12 133 + 122 Gaps:8 45.97 248 42.11 3e-19 Floral homeotic protein AGAMOUS OS Nicotiana tabacum GN AG1 PE 2 SV 1
blastp_uniprot_sprot sp|Q01540|AG_BRANA 12 139 + 128 Gaps:8 47.62 252 40.83 5e-19 Floral homeotic protein AGAMOUS OS Brassica napus GN AG1 PE 2 SV 1
blastp_uniprot_sprot sp|Q40872|AG_PANGI 12 139 + 128 Gaps:8 49.59 242 40.83 6e-19 Floral homeotic protein AGAMOUS OS Panax ginseng GN AG2 PE 2 SV 1
blastp_uniprot_sprot sp|Q38836|AGL11_ARATH 15 133 + 119 Gaps:8 48.26 230 43.24 7e-19 Agamous-like MADS-box protein AGL11 OS Arabidopsis thaliana GN AGL11 PE 1 SV 1
blastp_uniprot_sprot sp|P17839|AG_ARATH 16 139 + 124 Gaps:8 46.03 252 42.24 7e-19 Floral homeotic protein AGAMOUS OS Arabidopsis thaliana GN AG PE 1 SV 2
blastp_uniprot_sprot sp|Q40168|AG_SOLLC 12 133 + 122 Gaps:8 45.97 248 42.98 1e-18 Floral homeotic protein AGAMOUS OS Solanum lycopersicum GN AG1 PE 2 SV 1
blastp_uniprot_sprot sp|Q40704|MADS3_ORYSJ 15 185 + 171 Gaps:16 65.68 236 38.71 1e-18 MADS-box transcription factor 3 OS Oryza sativa subsp. japonica GN MADS3 PE 2 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 12 191 180 PTHR11945 none none none
PANTHER 12 191 180 PTHR11945:SF141 none none none
ProSiteProfiles 15 75 61 PS50066 "Reactome:REACT_21303" MADS-box domain profile. IPR002100
SMART 15 74 60 SM00432 "Reactome:REACT_21303" none IPR002100
PRINTS 52 73 22 PR00404 "Reactome:REACT_21303" MADS domain signature IPR002100
PRINTS 17 37 21 PR00404 "Reactome:REACT_21303" MADS domain signature IPR002100
PRINTS 37 52 16 PR00404 "Reactome:REACT_21303" MADS domain signature IPR002100
SUPERFAMILY 16 88 73 SSF55455 "Reactome:REACT_21303" none IPR002100
Pfam 25 71 47 PF00319 "Reactome:REACT_21303" SRF-type transcription factor (DNA-binding and dimerisation domain) IPR002100
Coils 102 137 36 Coil none none none

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting