Protein : Qrob_P0138660.2 Q. robur
Protein Identifier  ? Qrob_P0138660.2 Organism . Name  Quercus robur
Score  72.1 Score Type  egn
Protein Description  (M=1) PTHR23076:SF49 - AAA-TYPE ATPASE FAMILY PROTEIN (PTHR23076:SF49) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 783  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0004222 metalloendopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101311798 1 782 + 782 Gaps:82 73.07 843 81.01 0.0 ATP-dependent zinc metalloprotease FtsH-like
blastp_kegg lcl|pmum:103330534 2 782 + 781 Gaps:82 72.44 849 80.49 0.0 ATP-dependent zinc metalloprotease FtsH
blastp_kegg lcl|pop:POPTR_0005s06110g 33 782 + 750 Gaps:84 79.35 736 79.79 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa001341mg 2 782 + 781 Gaps:82 72.44 849 80.33 0.0 hypothetical protein
blastp_kegg lcl|vvi:100259256 1 782 + 782 Gaps:8 72.64 848 83.28 0.0 ATP-dependent zinc metalloprotease FtsH-like
blastp_kegg lcl|pxb:103954890 2 782 + 781 Gaps:83 72.32 849 79.32 0.0 ATP-dependent zinc metalloprotease FtsH
blastp_kegg lcl|cic:CICLE_v10000267mg 1 782 + 782 Gaps:8 72.90 845 80.19 0.0 hypothetical protein
blastp_kegg lcl|cit:102614574 1 782 + 782 Gaps:8 72.90 845 80.19 0.0 ATP-dependent zinc metalloprotease FtsH-like
blastp_kegg lcl|tcc:TCM_001455 1 782 + 782 Gaps:82 70.08 879 79.71 0.0 AAA-type ATPase family protein isoform 1
blastp_kegg lcl|pda:103711047 1 782 + 782 Gaps:82 71.88 857 75.16 0.0 ATP-dependent zinc metalloprotease FtsH
blastp_pdb 3kds_G 426 680 + 255 Gaps:30 56.13 465 28.35 2e-10 mol:protein length:465 Cell division protein FtsH
blastp_pdb 3kds_F 426 680 + 255 Gaps:30 56.13 465 28.35 2e-10 mol:protein length:465 Cell division protein FtsH
blastp_pdb 3kds_E 426 680 + 255 Gaps:30 56.13 465 28.35 2e-10 mol:protein length:465 Cell division protein FtsH
blastp_pdb 2cea_F 426 680 + 255 Gaps:30 54.83 476 28.35 3e-10 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_E 426 680 + 255 Gaps:30 54.83 476 28.35 3e-10 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_D 426 680 + 255 Gaps:30 54.83 476 28.35 3e-10 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_C 426 680 + 255 Gaps:30 54.83 476 28.35 3e-10 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_B 426 680 + 255 Gaps:30 54.83 476 28.35 3e-10 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_A 426 680 + 255 Gaps:30 54.83 476 28.35 3e-10 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_F 426 680 + 255 Gaps:30 54.83 476 28.35 3e-10 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_uniprot_sprot sp|Q5Z974|FTSH1_ORYSJ 298 679 + 382 Gaps:36 38.48 686 28.03 1e-14 ATP-dependent zinc metalloprotease FTSH 1 chloroplastic OS Oryza sativa subsp. japonica GN FTSH1 PE 2 SV 1
blastp_uniprot_sprot sp|O82150|FTSH_TOBAC 298 679 + 382 Gaps:32 36.97 714 26.52 5e-14 ATP-dependent zinc metalloprotease FTSH chloroplastic OS Nicotiana tabacum GN FTSH PE 2 SV 2
blastp_uniprot_sprot sp|Q55700|FTSH2_SYNY3 426 686 + 261 Gaps:23 42.42 627 26.69 8e-14 ATP-dependent zinc metalloprotease FtsH 2 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN ftsH2 PE 1 SV 1
blastp_uniprot_sprot sp|P72991|FTSH3_SYNY3 298 675 + 378 Gaps:30 42.21 616 28.46 9e-14 ATP-dependent zinc metalloprotease FtsH 3 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN ftsH3 PE 1 SV 1
blastp_uniprot_sprot sp|O19922|FTSH_CYACA 298 678 + 381 Gaps:39 42.02 614 29.84 1e-13 ATP-dependent zinc metalloprotease FtsH OS Cyanidium caldarium GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|Q39102|FTSH1_ARATH 298 679 + 382 Gaps:36 36.87 716 27.65 1e-13 ATP-dependent zinc metalloprotease FTSH 1 chloroplastic OS Arabidopsis thaliana GN FTSH1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9BAE0|FTSH_MEDSA 298 679 + 382 Gaps:33 37.25 706 26.62 3e-13 ATP-dependent zinc metalloprotease FTSH chloroplastic OS Medicago sativa GN FTSH PE 1 SV 1
blastp_uniprot_sprot sp|D1C1U7|FTSH1_SPHTD 297 701 + 405 Gaps:40 43.03 653 28.83 3e-13 ATP-dependent zinc metalloprotease FtsH 1 OS Sphaerobacter thermophilus (strain DSM 20745 / S 6022) GN ftsH1 PE 3 SV 1
blastp_uniprot_sprot sp|Q39444|FTSH_CAPAN 298 610 + 313 Gaps:18 27.34 662 32.60 4e-13 ATP-dependent zinc metalloprotease FTSH chloroplastic (Fragment) OS Capsicum annuum GN FTSH PE 2 SV 1
blastp_uniprot_sprot sp|B9KXV3|FTSH1_THERP 297 700 + 404 Gaps:48 42.94 652 31.07 6e-13 ATP-dependent zinc metalloprotease FtsH 1 OS Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN ftsH1 PE 3 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 2 26 25 Coil none none none
Pfam 496 677 182 PF01434 none Peptidase family M41 IPR000642
Phobius 1 224 224 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 250 782 533 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Coils 291 319 29 Coil none none none
PANTHER 166 776 611 PTHR23076 none none none
PANTHER 7 91 85 PTHR23076 none none none
Gene3D 297 348 52 G3DSA:1.10.8.60 none none none
Gene3D 438 489 52 G3DSA:1.10.8.60 none none none
Phobius 225 249 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Coils 432 460 29 Coil none none none
SUPERFAMILY 504 686 183 SSF140990 none none none
PANTHER 166 776 611 PTHR23076:SF49 none none none
PANTHER 7 91 85 PTHR23076:SF49 none none none

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting