2 GO Terms
| Identifier | Name | Description |
|---|---|---|
| GO:0046872 | metal ion binding | Interacting selectively and non-covalently with any metal ion. |
| GO:0030001 | metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
10 Blast
| Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
|---|---|---|---|---|---|---|---|---|---|---|---|
| blastp_kegg | lcl|fve:101294110 | 15 | 269 | + | 255 | Gaps:22 | 89.82 | 275 | 67.21 | 7e-98 | uncharacterized protein LOC101294110 |
| blastp_kegg | lcl|mdm:103407878 | 5 | 269 | + | 265 | Gaps:24 | 87.05 | 332 | 62.28 | 4e-97 | DNA ligase 1 |
| blastp_kegg | lcl|tcc:TCM_011949 | 15 | 269 | + | 255 | Gaps:27 | 94.21 | 242 | 64.91 | 5e-96 | Metal ion binding protein putative |
| blastp_kegg | lcl|rcu:RCOM_0659680 | 1 | 269 | + | 269 | Gaps:24 | 100.00 | 249 | 62.25 | 3e-94 | metal ion binding protein putative |
| blastp_kegg | lcl|pmum:103331384 | 15 | 269 | + | 255 | Gaps:23 | 91.15 | 305 | 58.99 | 1e-92 | neurofilament heavy polypeptide |
| blastp_kegg | lcl|gmx:100783418 | 1 | 269 | + | 269 | Gaps:11 | 100.00 | 278 | 58.99 | 2e-87 | uncharacterized LOC100783418 |
| blastp_kegg | lcl|cam:101502292 | 13 | 269 | + | 257 | Gaps:8 | 90.29 | 278 | 56.18 | 6e-84 | DNA ligase 1-like |
| blastp_kegg | lcl|cit:102625478 | 13 | 269 | + | 257 | Gaps:35 | 96.97 | 231 | 59.82 | 6e-80 | uncharacterized LOC102625478 |
| blastp_kegg | lcl|brp:103828993 | 15 | 269 | + | 255 | Gaps:17 | 95.20 | 271 | 57.75 | 3e-79 | 101 kDa malaria antigen |
| blastp_kegg | lcl|vvi:100249861 | 15 | 269 | + | 255 | Gaps:35 | 94.07 | 236 | 59.91 | 1e-77 | uncharacterized LOC100249861 |
10 Domain Motifs
| Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
|---|---|---|---|---|---|---|---|
| Coils | 165 | 197 | 33 | Coil | none | none | none |
| Pfam | 110 | 166 | 57 | PF00403 | none | Heavy-metal-associated domain | IPR006121 |
| Pfam | 20 | 77 | 58 | PF00403 | none | Heavy-metal-associated domain | IPR006121 |
| Gene3D | 16 | 75 | 60 | G3DSA:3.30.70.100 | none | none | none |
| Gene3D | 106 | 170 | 65 | G3DSA:3.30.70.100 | none | none | none |
| PANTHER | 13 | 208 | 196 | PTHR22814:SF74 | none | none | none |
| ProSiteProfiles | 23 | 79 | 57 | PS50846 | none | Heavy-metal-associated domain profile. | IPR006121 |
| PANTHER | 13 | 208 | 196 | PTHR22814 | none | none | none |
| SUPERFAMILY | 105 | 162 | 58 | SSF55008 | none | none | IPR006121 |
| SUPERFAMILY | 19 | 75 | 57 | SSF55008 | none | none | IPR006121 |
6 Qtllist
| Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
|---|---|---|---|---|---|---|---|---|---|---|
| Bourran1_2004_QTL5_peak_Bud_burst_A4 | Qrob_Chr10 | 10 | s_1C8OKQ_688 | v_12844_707 | 25,6 | 13,9 | 39,9 | lod | 2,7 | 6,1 |
| Bourran2_2002_QTL13_peak_Bud_burst_3P | Qrob_Chr10 | 10 | s_1B1AG7_637 | s_1A3A1N_709 | 19,44 | 0 | 49,44 | lod | 3 | 5,6 |
| Bourran2_2002_QTL15_peak_Bud_burst_A4 | Qrob_Chr10 | 10 | v_7579_71 | s_1ATZMJ_189 | 23,94 | 0 | 43,64 | lod | 3,7 | 5,4 |
| Bourran2_2014_vSeqBC_A4 | Qrob_Chr10 | 10 | s_1BAM4E_1326 | s_1C0HD0_1012 | 36,88 | 7,71 | 46,03 | lod | 2,6164 | 7,3 |
| Champenoux_2015_nPriLBD_3P | Qrob_Chr10 | 10 | v_15000_157 | v_15000_310 | 15,68 | 15,9 | 15,91 | lod | 2.4 | 5.5 |
| PM_1999_QTL16_peak_Bud_burst_3P | Qrob_Chr10 | 10 | s_1B6YNI_505 | s_1A1ZO_1322 | 7,48 | 0 | 31,48 | lod | 4 | 7,1 |
