Protein : Qrob_P0131510.2 Q. robur
Protein Identifier  ? Qrob_P0131510.2 Organism . Name  Quercus robur
Score  73.1 Score Type  egn
Protein Description  (M=2) 2.1.3.2 - Aspartate carbamoyltransferase. Code Enzyme  EC:2.1.3.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 402  
Kegg Orthology  K00609
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016597 amino acid binding Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents.
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.
GO:0006520 cellular amino acid metabolic process The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
GO:0004070 aspartate carbamoyltransferase activity Catalysis of the reaction: L-aspartate + carbamoyl phosphate = N-carbamoyl-L-aspartate + H(+) + phosphate.
GO:0016743 carboxyl- or carbamoyltransferase activity Catalysis of the transfer of a carboxyl- or carbamoyl group from one compound (donor) to another (acceptor).

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa006647mg 1 401 + 401 none 100.00 401 82.29 0.0 hypothetical protein
blastp_kegg lcl|pmum:103326530 1 401 + 401 Gaps:8 100.00 393 81.93 0.0 aspartate carbamoyltransferase 1 chloroplastic
blastp_kegg lcl|vvi:100246977 1 401 + 401 Gaps:6 100.00 403 79.90 0.0 aspartate carbamoyltransferase 2 chloroplastic-like
blastp_kegg lcl|tcc:TCM_030814 1 401 + 401 Gaps:2 100.00 401 82.04 0.0 Pyrimidine b
blastp_kegg lcl|cic:CICLE_v10025758mg 4 401 + 398 Gaps:5 99.51 405 80.65 0.0 hypothetical protein
blastp_kegg lcl|cit:102625657 4 401 + 398 Gaps:5 99.51 405 80.15 0.0 aspartate carbamoyltransferase 3 chloroplastic-like
blastp_kegg lcl|gmx:100796746 1 401 + 401 Gaps:3 100.00 398 78.64 0.0 aspartate carbamoyltransferase 3 chloroplastic-like
blastp_kegg lcl|cam:101515686 1 401 + 401 Gaps:22 100.00 391 79.03 0.0 aspartate carbamoyltransferase 3 chloroplastic-like
blastp_kegg lcl|fve:101296168 1 392 + 392 none 88.49 443 79.59 0.0 aspartate carbamoyltransferase 2 chloroplastic-like
blastp_kegg lcl|fve:101312188 1 401 + 401 Gaps:28 100.00 373 84.99 0.0 aspartate carbamoyltransferase 2 chloroplastic-like
blastp_pdb 4ekn_B 112 398 + 287 Gaps:4 92.48 306 51.59 2e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_N 112 398 + 287 Gaps:4 92.48 306 51.59 2e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_M 112 398 + 287 Gaps:4 92.48 306 51.59 2e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_L 112 398 + 287 Gaps:4 92.48 306 51.59 2e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_K 112 398 + 287 Gaps:4 92.48 306 51.59 2e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_J 112 398 + 287 Gaps:4 92.48 306 51.59 2e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_I 112 398 + 287 Gaps:4 92.48 306 51.59 2e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_F 112 398 + 287 Gaps:4 92.48 306 51.59 2e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_E 112 398 + 287 Gaps:4 92.48 306 51.59 2e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_D 112 398 + 287 Gaps:4 92.48 306 51.59 2e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_uniprot_sprot sp|Q43087|PYRB2_PEA 1 401 + 401 Gaps:16 100.00 385 78.18 0.0 Aspartate carbamoyltransferase 2 chloroplastic OS Pisum sativum GN PYRB2 PE 2 SV 1
blastp_uniprot_sprot sp|Q43064|PYRB3_PEA 1 401 + 401 Gaps:10 100.00 391 76.73 0.0 Aspartate carbamoyltransferase 3 chloroplastic OS Pisum sativum GN PYRB3 PE 2 SV 1
blastp_uniprot_sprot sp|Q43086|PYRB1_PEA 67 401 + 335 Gaps:2 87.31 386 85.16 0.0 Aspartate carbamoyltransferase 1 chloroplastic OS Pisum sativum GN PYRB1 PE 2 SV 1
blastp_uniprot_sprot sp|P49077|PYRB_ARATH 1 401 + 401 Gaps:19 100.00 390 75.13 0.0 Aspartate carbamoyltransferase chloroplastic OS Arabidopsis thaliana GN PYRB PE 2 SV 2
blastp_uniprot_sprot sp|Q9LD61|PYRB_ORYSJ 93 400 + 308 Gaps:5 86.23 363 84.03 0.0 Aspartate carbamoyltransferase chloroplastic OS Oryza sativa subsp. japonica GN PYRB PE 2 SV 1
blastp_uniprot_sprot sp|Q8U373|PYRB_PYRFU 97 398 + 302 Gaps:3 97.08 308 51.84 7e-93 Aspartate carbamoyltransferase OS Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN pyrB PE 3 SV 1
blastp_uniprot_sprot sp|O58451|PYRB_PYRHO 97 398 + 302 Gaps:3 97.08 308 50.17 6e-91 Aspartate carbamoyltransferase OS Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN pyrB PE 3 SV 1
blastp_uniprot_sprot sp|A5UMP0|PYRB_METS3 91 398 + 308 Gaps:4 96.20 316 46.38 2e-90 Aspartate carbamoyltransferase OS Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN pyrB PE 3 SV 1
blastp_uniprot_sprot sp|Q58976|PYRB_METJA 112 398 + 287 Gaps:4 92.48 306 51.59 6e-90 Aspartate carbamoyltransferase OS Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN pyrB PE 1 SV 1
blastp_uniprot_sprot sp|P77918|PYRB_PYRAB 97 398 + 302 Gaps:3 97.08 308 49.83 9e-90 Aspartate carbamoyltransferase OS Pyrococcus abyssi (strain GE5 / Orsay) GN pyrB PE 1 SV 1

24 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Hamap 95 400 306 MF_00001 "KEGG:00240+2.1.3.2","KEGG:00250+2.1.3.2","MetaCyc:PWY-5686","UniPathway:UPA00070" Aspartate carbamoyltransferase [pyrB]. IPR002082
Phobius 1 1 1 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 93 398 306 SSF53671 none none IPR006130
TIGRFAM 97 398 302 TIGR00670 "KEGG:00240+2.1.3.2","KEGG:00250+2.1.3.2","MetaCyc:PWY-5686","UniPathway:UPA00070" asp_carb_tr: aspartate carbamoyltransferase IPR002082
Phobius 13 17 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 97 239 143 PF02729 none Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IPR006132
Phobius 18 401 384 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 238 385 148 G3DSA:3.40.50.1370 none none IPR006130
Phobius 2 12 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 92 389 298 PTHR11405 none none none
PRINTS 353 362 10 PR00100 none Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130
PRINTS 363 386 24 PR00100 none Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130
PRINTS 141 160 20 PR00100 none Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130
PRINTS 226 237 12 PR00100 none Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130
ProSitePatterns 141 148 8 PS00097 none Aspartate and ornithine carbamoyltransferases signature. IPR006130
PRINTS 379 393 15 PR00101 "KEGG:00240+2.1.3.2","KEGG:00250+2.1.3.2","MetaCyc:PWY-5686","UniPathway:UPA00070" Aspartate carbamoyltransferase signature IPR002082
PRINTS 357 362 6 PR00101 "KEGG:00240+2.1.3.2","KEGG:00250+2.1.3.2","MetaCyc:PWY-5686","UniPathway:UPA00070" Aspartate carbamoyltransferase signature IPR002082
PRINTS 171 180 10 PR00101 "KEGG:00240+2.1.3.2","KEGG:00250+2.1.3.2","MetaCyc:PWY-5686","UniPathway:UPA00070" Aspartate carbamoyltransferase signature IPR002082
PRINTS 131 153 23 PR00101 "KEGG:00240+2.1.3.2","KEGG:00250+2.1.3.2","MetaCyc:PWY-5686","UniPathway:UPA00070" Aspartate carbamoyltransferase signature IPR002082
PRINTS 225 242 18 PR00101 "KEGG:00240+2.1.3.2","KEGG:00250+2.1.3.2","MetaCyc:PWY-5686","UniPathway:UPA00070" Aspartate carbamoyltransferase signature IPR002082
PRINTS 317 326 10 PR00101 "KEGG:00240+2.1.3.2","KEGG:00250+2.1.3.2","MetaCyc:PWY-5686","UniPathway:UPA00070" Aspartate carbamoyltransferase signature IPR002082
Gene3D 97 237 141 G3DSA:3.40.50.1370 none none IPR006130
Pfam 245 397 153 PF00185 none Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IPR006131
Phobius 1 17 17 SIGNAL_PEPTIDE none Signal peptide region none

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting