Protein : Qrob_P0126640.2 Q. robur
Protein Identifier  ? Qrob_P0126640.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=10) PTHR11945:SF141 - MYOCYTE-SPECIFIC ENHANCER FACTOR 2 (PTHR11945:SF141) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 222  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0046983 protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa024464mg 3 168 + 166 Gaps:10 76.52 230 49.43 2e-48 hypothetical protein
blastp_kegg lcl|pmum:103331557 3 168 + 166 Gaps:14 76.92 234 48.89 3e-46 agamous-like MADS-box protein AGL62
blastp_kegg lcl|mdm:103407015 3 168 + 166 Gaps:14 76.92 234 50.00 3e-46 agamous-like MADS-box protein AGL62
blastp_kegg lcl|pxb:103928179 3 168 + 166 Gaps:14 76.92 234 48.89 3e-43 agamous-like MADS-box protein AGL62
blastp_kegg lcl|pxb:103928168 3 168 + 166 Gaps:14 76.92 234 48.89 3e-43 agamous-like MADS-box protein AGL62
blastp_kegg lcl|rcu:RCOM_0101370 5 170 + 166 Gaps:6 78.34 217 45.88 4e-43 mads box protein putative
blastp_kegg lcl|cmo:103497390 5 168 + 164 Gaps:12 83.24 185 49.35 3e-40 agamous-like MADS-box protein AGL62
blastp_kegg lcl|tcc:TCM_006325 3 193 + 191 Gaps:8 88.53 218 44.04 2e-39 Mads box protein putative
blastp_kegg lcl|gmx:100782074 5 170 + 166 Gaps:11 94.22 173 49.08 3e-39 agamous-like MADS-box protein AGL61-like
blastp_kegg lcl|cmo:103503920 5 175 + 171 Gaps:12 71.98 232 49.70 6e-39 agamous-like MADS-box protein AGL62
blastp_pdb 1c7u_B 9 75 + 67 Gaps:1 80.00 85 44.12 8e-13 mol:protein length:85 MYOCYTE-SPECIFIC ENHANCER FACTOR 2A C4 FORM
blastp_pdb 1c7u_A 9 75 + 67 Gaps:1 80.00 85 44.12 8e-13 mol:protein length:85 MYOCYTE-SPECIFIC ENHANCER FACTOR 2A C4 FORM
blastp_pdb 1egw_D 9 75 + 67 Gaps:1 88.31 77 42.65 4e-12 mol:protein length:77 MADS BOX TRANSCRIPTION ENHANCER FACTOR 2 POL
blastp_pdb 1egw_C 9 75 + 67 Gaps:1 88.31 77 42.65 4e-12 mol:protein length:77 MADS BOX TRANSCRIPTION ENHANCER FACTOR 2 POL
blastp_pdb 1egw_B 9 75 + 67 Gaps:1 88.31 77 42.65 4e-12 mol:protein length:77 MADS BOX TRANSCRIPTION ENHANCER FACTOR 2 POL
blastp_pdb 1egw_A 9 75 + 67 Gaps:1 88.31 77 42.65 4e-12 mol:protein length:77 MADS BOX TRANSCRIPTION ENHANCER FACTOR 2 POL
blastp_pdb 3p57_J 9 75 + 67 Gaps:1 75.56 90 42.65 6e-12 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3p57_I 9 75 + 67 Gaps:1 75.56 90 42.65 6e-12 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3p57_D 9 75 + 67 Gaps:1 75.56 90 42.65 6e-12 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_pdb 3p57_C 9 75 + 67 Gaps:1 75.56 90 42.65 6e-12 mol:protein length:90 Myocyte-specific enhancer factor 2A
blastp_uniprot_sprot sp|Q4PSU4|AGL61_ARATH 9 205 + 197 Gaps:14 72.35 264 40.31 2e-31 Agamous-like MADS-box protein AGL61 OS Arabidopsis thaliana GN AGL61 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FKK2|AGL62_ARATH 3 165 + 163 Gaps:13 55.52 299 35.54 2e-26 Agamous-like MADS-box protein AGL62 OS Arabidopsis thaliana GN AGL62 PE 1 SV 1
blastp_uniprot_sprot sp|Q6VAM4|MAD23_ORYSJ 9 75 + 67 Gaps:1 42.77 159 50.00 5e-15 MADS-box transcription factor 23 OS Oryza sativa subsp. japonica GN MADS23 PE 2 SV 1
blastp_uniprot_sprot sp|Q40885|AG_PETHY 2 91 + 90 Gaps:5 39.26 242 40.00 9e-15 Floral homeotic protein AGAMOUS OS Petunia hybrida GN AG1 PE 1 SV 1
blastp_uniprot_sprot sp|Q39295|AGL15_BRANA 9 75 + 67 Gaps:1 25.76 264 57.35 9e-15 Agamous-like MADS-box protein AGL15 OS Brassica napus GN AGL15 PE 3 SV 1
blastp_uniprot_sprot sp|Q43585|AG_TOBAC 2 101 + 100 Gaps:7 38.31 248 42.11 1e-14 Floral homeotic protein AGAMOUS OS Nicotiana tabacum GN AG1 PE 2 SV 1
blastp_uniprot_sprot sp|Q40168|AG_SOLLC 2 101 + 100 Gaps:7 38.31 248 42.11 2e-14 Floral homeotic protein AGAMOUS OS Solanum lycopersicum GN AG1 PE 2 SV 1
blastp_uniprot_sprot sp|Q655V4|MAD30_ORYSJ 9 171 + 163 Gaps:26 66.52 221 38.10 2e-14 MADS-box transcription factor 30 OS Oryza sativa subsp. japonica GN MADS30 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M2K8|AGL18_ARATH 9 119 + 111 Gaps:12 48.05 256 38.21 2e-14 Agamous-like MADS-box protein AGL18 OS Arabidopsis thaliana GN AGL18 PE 2 SV 1
blastp_uniprot_sprot sp|P29386|AGL6_ARATH 9 75 + 67 Gaps:1 26.98 252 54.41 3e-14 Agamous-like MADS-box protein AGL6 OS Arabidopsis thaliana GN AGL6 PE 1 SV 2

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 3 75 73 PTHR11945:SF141 none none none
Pfam 22 63 42 PF00319 "Reactome:REACT_21303" SRF-type transcription factor (DNA-binding and dimerisation domain) IPR002100
SMART 8 66 59 SM00432 "Reactome:REACT_21303" none IPR002100
Coils 94 129 36 Coil none none none
PANTHER 3 75 73 PTHR11945 none none none
ProSiteProfiles 8 67 60 PS50066 "Reactome:REACT_21303" MADS-box domain profile. IPR002100
SUPERFAMILY 9 77 69 SSF55455 "Reactome:REACT_21303" none IPR002100
PRINTS 9 29 21 PR00404 "Reactome:REACT_21303" MADS domain signature IPR002100
PRINTS 29 44 16 PR00404 "Reactome:REACT_21303" MADS domain signature IPR002100
PRINTS 44 65 22 PR00404 "Reactome:REACT_21303" MADS domain signature IPR002100

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting