Protein : Qrob_P0121990.2 Q. robur
Protein Identifier  ? Qrob_P0121990.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) K09060 - plant G-box-binding factor Gene Prediction Quality  validated
Protein length 

Sequence

Length: 382  
Kegg Orthology  K09060
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0006351 transcription, DNA-templated The cellular synthesis of RNA on a template of DNA.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa006173mg 1 379 + 379 Gaps:67 100.00 424 61.56 9e-157 hypothetical protein
blastp_kegg lcl|mtr:MTR_7g116890 1 379 + 379 Gaps:62 100.00 425 59.76 7e-155 G-box binding factor
blastp_kegg lcl|pmum:103332281 1 379 + 379 Gaps:67 100.00 424 61.08 3e-153 common plant regulatory factor 1-like
blastp_kegg lcl|cam:101498921 1 379 + 379 Gaps:63 100.00 424 59.67 3e-152 common plant regulatory factor 1-like
blastp_kegg lcl|gmx:100781875 1 379 + 379 Gaps:62 100.00 425 60.24 2e-151 common plant regulatory factor 1-like
blastp_kegg lcl|pxb:103965877 1 379 + 379 Gaps:69 100.00 424 59.43 5e-150 common plant regulatory factor 1
blastp_kegg lcl|mdm:103406197 1 379 + 379 Gaps:68 100.00 423 58.63 5e-147 common plant regulatory factor 1-like
blastp_kegg lcl|cic:CICLE_v10020314mg 1 379 + 379 Gaps:70 100.00 421 60.33 5e-146 hypothetical protein
blastp_kegg lcl|cit:102607505 1 379 + 379 Gaps:70 100.00 421 60.33 5e-146 common plant regulatory factor 1-like
blastp_kegg lcl|vvi:100248302 1 379 + 379 Gaps:71 100.00 430 59.30 2e-145 common plant regulatory factor 1-like
blastp_uniprot_sprot sp|P42776|GBF3_ARATH 5 379 + 375 Gaps:69 98.43 382 51.06 4e-95 G-box-binding factor 3 OS Arabidopsis thaliana GN GBF3 PE 1 SV 2
blastp_uniprot_sprot sp|Q99089|CPRF1_PETCR 29 379 + 351 Gaps:77 93.92 411 46.11 2e-94 Common plant regulatory factor 1 OS Petroselinum crispum GN CPRF1 PE 2 SV 1
blastp_uniprot_sprot sp|Q99142|TAF1_TOBAC 58 300 + 243 Gaps:40 98.49 265 50.96 5e-67 Transcriptional activator TAF-1 (Fragment) OS Nicotiana tabacum GN TAF1 PE 2 SV 1
blastp_uniprot_sprot sp|P42775|GBF2_ARATH 1 378 + 378 Gaps:111 99.72 360 45.96 2e-63 G-box-binding factor 2 OS Arabidopsis thaliana GN GBF2 PE 1 SV 1
blastp_uniprot_sprot sp|P42774|GBF1_ARATH 38 300 + 263 Gaps:42 72.70 315 41.05 4e-25 G-box-binding factor 1 OS Arabidopsis thaliana GN GBF1 PE 2 SV 2
blastp_uniprot_sprot sp|P25032|EMBP1_WHEAT 229 310 + 82 none 23.16 354 54.88 3e-17 DNA-binding protein EMBP-1 OS Triticum aestivum PE 1 SV 1
blastp_uniprot_sprot sp|P23922|HBP1A_WHEAT 224 299 + 76 Gaps:2 21.20 349 51.35 1e-13 Transcription factor HBP-1a OS Triticum aestivum PE 2 SV 1
blastp_uniprot_sprot sp|Q99091|CPRF3_PETCR 193 299 + 107 Gaps:3 35.14 296 39.42 2e-12 Light-inducible protein CPRF3 OS Petroselinum crispum GN CPRF3 PE 2 SV 1
blastp_uniprot_sprot sp|P24068|OCS1_MAIZE 234 305 + 72 Gaps:2 46.36 151 38.57 4e-06 Ocs element-binding factor 1 OS Zea mays GN OBF1 PE 2 SV 2
rpsblast_cdd gnl|CDD|116391 1 154 + 154 Gaps:49 100.00 189 39.68 1e-36 pfam07777 MFMR G-box binding protein MFMR. This region is found to the N-terminus of the pfam00170 transcription factor domain. It is between 150 and 200 amino acids in length. The N-terminal half is rather rich in proline residues and has been termed the PRD (proline rich domain) whereas the C-terminal half is more polar and has been called the MFMR (multifunctional mosaic region). It has been suggested that this family is composed of three sub-families called A B and C classified according to motif composition. It has been suggested that some of these motifs may be involved in mediating protein-protein interactions. The MFMR region contains a nuclear localisation signal in bZIP opaque and GBF-2. The MFMR also contains a transregulatory activity in TAF-1. The MFMR in CPRF-2 contains cytoplasmic retention signals.
rpsblast_cdd gnl|CDD|201054 230 292 + 63 none 98.44 64 57.14 2e-15 pfam00170 bZIP_1 bZIP transcription factor. The Pfam entry includes the basic region and the leucine zipper region.
rpsblast_cdd gnl|CDD|197664 230 293 + 64 none 98.46 65 56.25 2e-15 smart00338 BRLZ basic region leucin zipper.

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 233 288 56 SSF57959 none none none
Coils 257 292 36 Coil none none none
PANTHER 115 180 66 PTHR22952:SF6 none none none
PANTHER 198 354 157 PTHR22952:SF6 none none none
PANTHER 38 72 35 PTHR22952:SF6 none none none
Pfam 230 292 63 PF00170 none bZIP transcription factor IPR004827
PANTHER 38 72 35 PTHR22952 none none none
Pfam 42 153 112 PF07777 none G-box binding protein MFMR IPR012900
ProSitePatterns 237 252 16 PS00036 none Basic-leucine zipper (bZIP) domain signature. IPR004827
ProSiteProfiles 232 295 64 PS50217 none Basic-leucine zipper (bZIP) domain profile. IPR004827
SMART 230 294 65 SM00338 none basic region leucin zipper IPR004827
PANTHER 115 180 66 PTHR22952 none none none
PANTHER 198 354 157 PTHR22952 none none none
Gene3D 224 289 66 G3DSA:1.20.5.170 none none none

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting