Protein : Qrob_P0120450.2 Q. robur
Protein Identifier  ? Qrob_P0120450.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) 1.2.4.2 - Oxoglutarate dehydrogenase (succinyl-transferring). Code Enzyme  EC:1.2.4.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 303  
Kegg Orthology  K00164
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

4 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0030976 thiamine pyrophosphate binding Interacting selectively and non-covalently with thiamine pyrophosphate, the diphosphoric ester of thiamine. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases.
GO:0006099 tricarboxylic acid cycle A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
GO:0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity Catalysis of the reaction: 2-oxoglutarate + lipoamide = S-succinyldihydrolipoamide + CO2.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|zma:100383847 1 302 + 302 none 72.60 416 89.74 0.0 TIDP3354 LOC100383847
blastp_kegg lcl|rcu:RCOM_0465620 1 302 + 302 none 29.58 1021 92.38 0.0 2-oxoglutarate dehydrogenase putative (EC:1.2.4.2)
blastp_kegg lcl|vvi:100254754 1 302 + 302 none 31.49 959 91.39 0.0 2-oxoglutarate dehydrogenase mitochondrial-like
blastp_kegg lcl|pper:PRUPE_ppa000728mg 1 300 + 300 none 29.38 1021 92.33 0.0 hypothetical protein
blastp_kegg lcl|mdm:103434412 1 301 + 301 none 29.54 1019 91.36 0.0 2-oxoglutarate dehydrogenase mitochondrial
blastp_kegg lcl|mdm:103406334 1 301 + 301 none 29.54 1019 91.36 0.0 2-oxoglutarate dehydrogenase mitochondrial-like
blastp_kegg lcl|pxb:103930021 1 301 + 301 none 29.11 1034 91.36 0.0 2-oxoglutarate dehydrogenase mitochondrial-like
blastp_kegg lcl|mdm:103406383 1 298 + 298 none 34.49 864 92.28 0.0 2-oxoglutarate dehydrogenase mitochondrial-like
blastp_kegg lcl|pmum:103332610 1 300 + 300 none 29.38 1021 91.67 0.0 2-oxoglutarate dehydrogenase mitochondrial-like
blastp_kegg lcl|mdm:103434762 1 298 + 298 none 29.24 1019 92.28 0.0 2-oxoglutarate dehydrogenase mitochondrial-like
blastp_pdb 2jgd_B 4 296 + 293 Gaps:37 27.65 933 52.71 1e-73 mol:protein length:933 2-OXOGLUTARATE DEHYDROGENASE E1 COMPONENT
blastp_pdb 2jgd_A 4 296 + 293 Gaps:37 27.65 933 52.71 4e-73 mol:protein length:933 2-OXOGLUTARATE DEHYDROGENASE E1 COMPONENT
blastp_pdb 2yid_D 3 292 + 290 Gaps:36 29.95 868 43.46 2e-61 mol:protein length:868 2-OXOGLUTARATE DECARBOXYLASE
blastp_pdb 2yid_C 3 292 + 290 Gaps:36 29.95 868 43.46 2e-61 mol:protein length:868 2-OXOGLUTARATE DECARBOXYLASE
blastp_pdb 2yid_B 3 292 + 290 Gaps:36 29.95 868 43.46 2e-61 mol:protein length:868 2-OXOGLUTARATE DECARBOXYLASE
blastp_pdb 2yid_A 3 292 + 290 Gaps:36 29.95 868 43.46 2e-61 mol:protein length:868 2-OXOGLUTARATE DECARBOXYLASE
blastp_pdb 2yic_D 3 292 + 290 Gaps:36 29.95 868 43.46 2e-61 mol:protein length:868 2-OXOGLUTARATE DECARBOXYLASE
blastp_pdb 2yic_C 3 292 + 290 Gaps:36 29.95 868 43.46 2e-61 mol:protein length:868 2-OXOGLUTARATE DECARBOXYLASE
blastp_pdb 2yic_B 3 292 + 290 Gaps:36 29.95 868 43.46 2e-61 mol:protein length:868 2-OXOGLUTARATE DECARBOXYLASE
blastp_pdb 2yic_A 3 292 + 290 Gaps:36 29.95 868 43.46 2e-61 mol:protein length:868 2-OXOGLUTARATE DECARBOXYLASE
blastp_uniprot_sprot sp|Q54JE4|ODO1_DICDI 1 281 + 281 Gaps:14 26.55 1013 54.65 1e-96 2-oxoglutarate dehydrogenase mitochondrial OS Dictyostelium discoideum GN ogdh PE 3 SV 1
blastp_uniprot_sprot sp|Q6P6Z8|ODO1_XENLA 1 292 + 292 Gaps:17 27.33 1021 54.12 1e-92 2-oxoglutarate dehydrogenase mitochondrial OS Xenopus laevis GN ogdh PE 2 SV 1
blastp_uniprot_sprot sp|Q9ULD0|OGDHL_HUMAN 1 292 + 292 Gaps:17 27.62 1010 52.33 8e-91 2-oxoglutarate dehydrogenase-like mitochondrial OS Homo sapiens GN OGDHL PE 1 SV 3
blastp_uniprot_sprot sp|Q60HE2|ODO1_MACFA 1 292 + 292 Gaps:18 27.37 1023 52.14 1e-90 2-oxoglutarate dehydrogenase mitochondrial OS Macaca fascicularis GN OGDH PE 2 SV 1
blastp_uniprot_sprot sp|Q623T0|ODO1_CAEBR 1 291 + 291 Gaps:23 27.46 1027 52.13 2e-90 2-oxoglutarate dehydrogenase mitochondrial OS Caenorhabditis briggsae GN CBG01737 PE 3 SV 1
blastp_uniprot_sprot sp|Q02218|ODO1_HUMAN 1 292 + 292 Gaps:18 27.37 1023 52.14 3e-90 2-oxoglutarate dehydrogenase mitochondrial OS Homo sapiens GN OGDH PE 1 SV 3
blastp_uniprot_sprot sp|O61199|ODO1_CAEEL 1 291 + 291 Gaps:19 27.41 1029 52.13 3e-90 2-oxoglutarate dehydrogenase mitochondrial OS Caenorhabditis elegans GN ogdh-1 PE 1 SV 2
blastp_uniprot_sprot sp|Q5XI78|ODO1_RAT 1 292 + 292 Gaps:24 27.37 1023 52.86 7e-90 2-oxoglutarate dehydrogenase mitochondrial OS Rattus norvegicus GN Ogdh PE 1 SV 1
blastp_uniprot_sprot sp|Q5RCB8|ODO1_PONAB 1 292 + 292 Gaps:18 27.37 1023 51.79 1e-89 2-oxoglutarate dehydrogenase mitochondrial OS Pongo abelii GN OGDH PE 2 SV 1
blastp_uniprot_sprot sp|Q5R9L8|OGDHL_PONAB 1 292 + 292 Gaps:17 27.62 1010 51.97 1e-89 2-oxoglutarate dehydrogenase-like mitochondrial OS Pongo abelii GN OGDHL PE 2 SV 2

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 298 298 PTHR23152:SF6 none none none
Pfam 1 131 131 PF02779 none Transketolase, pyrimidine binding domain IPR005475
SUPERFAMILY 6 136 131 SSF52518 none none IPR029061
PANTHER 1 298 298 PTHR23152 "KEGG:00020+1.2.4.2","KEGG:00310+1.2.4.2","KEGG:00380+1.2.4.2","MetaCyc:PWY-5084";signature_desc=2-OXOGLUTARATE DEHYDROGENASE none IPR011603
SMART 1 130 130 SM00861 none Transketolase, pyrimidine binding domain IPR005475
Gene3D 8 132 125 G3DSA:3.40.50.970 none none IPR029061

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting