Protein : Qrob_P0120040.2 Q. robur
Protein Identifier  ? Qrob_P0120040.2 Organism . Name  Quercus robur
Score  97.1 Score Type  egn
Protein Description  (M=1) 1.8.7.2 - Ferredoxin:thioredoxin reductase. Code Enzyme  EC:1.8.7.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 115  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0015979 photosynthesis The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
GO:0051539 4 iron, 4 sulfur cluster binding Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.
GO:0009107 lipoate biosynthetic process The chemical reactions and pathways resulting in the formation of lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid.
GO:0016992 lipoate synthase activity Catalysis of the reaction: protein N6-(octanoyl)lysine + 2 sulfur + 2 S-adenosyl-L-methionine = protein N6-(lipoyl)lysine + 2 L-methionine + 2 5'-deoxyadenosyl.

14 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103403375 2 114 + 113 Gaps:10 61.31 168 72.82 2e-43 ferredoxin-thioredoxin reductase variable chain-like
blastp_kegg lcl|pxb:103943249 2 114 + 113 Gaps:10 61.31 168 72.82 4e-43 ferredoxin-thioredoxin reductase variable chain-like
blastp_kegg lcl|vvi:100257686 2 114 + 113 Gaps:3 65.48 168 74.55 2e-42 ferredoxin-thioredoxin reductase variable chain chloroplastic-like
blastp_kegg lcl|mdm:103451428 2 114 + 113 Gaps:9 63.41 164 71.15 2e-41 ferredoxin-thioredoxin reductase variable chain
blastp_kegg lcl|pmum:103321364 2 114 + 113 Gaps:3 80.58 139 69.64 3e-41 ferredoxin-thioredoxin reductase variable chain-like
blastp_kegg lcl|tcc:TCM_007634 18 114 + 97 Gaps:9 60.71 168 67.65 3e-41 Ferredoxin/thioredoxin reductase subunit A 2
blastp_kegg lcl|pper:PRUPE_ppa012324mg 2 114 + 113 Gaps:3 64.37 174 68.75 9e-41 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1454610 1 114 + 114 Gaps:6 58.70 184 71.30 9e-41 lipoic acid synthetase putative
blastp_kegg lcl|fve:101314461 2 114 + 113 Gaps:16 18.23 532 76.29 2e-39 lipoyl synthase chloroplastic-like
blastp_kegg lcl|crb:CARUB_v10003540mg 2 114 + 113 Gaps:12 61.41 184 61.06 2e-37 hypothetical protein
blastp_uniprot_sprot sp|P80680|FTRV_MAIZE 19 114 + 96 Gaps:1 97.94 97 54.74 6e-31 Ferredoxin-thioredoxin reductase variable chain OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|P38365|FTRV_SPIOL 35 114 + 80 Gaps:3 45.40 174 54.43 8e-22 Ferredoxin-thioredoxin reductase variable chain chloroplastic OS Spinacia oleracea GN FTRV PE 1 SV 2
blastp_uniprot_sprot sp|P24018|FTRV_SYNP6 35 112 + 78 Gaps:12 95.89 73 42.86 7e-07 Ferredoxin-thioredoxin reductase variable chain OS Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN ftrV PE 1 SV 1
rpsblast_cdd gnl|CDD|190483 36 110 + 75 Gaps:12 100.00 67 56.72 6e-22 pfam02941 FeThRed_A Ferredoxin thioredoxin reductase variable alpha chain.

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProDom 35 114 80 PD015034 none FERREDOXIN-THIOREDOXIN VARIABLE CHAIN REDUCTASE REDUCTASE SUBUNIT A THIOREDOXIN OXIDOREDUCTASE FTR-V IPR004207
Pfam 36 110 75 PF02941 none Ferredoxin thioredoxin reductase variable alpha chain IPR004207
SUPERFAMILY 35 113 79 SSF50090 none none IPR008990
PANTHER 49 114 66 PTHR10949 "KEGG:00785+2.8.1.8","MetaCyc:PWY-6987","MetaCyc:PWY-7381","MetaCyc:PWY-7382","UniPathway:UPA00538";signature_desc=LIPOYL SYNTHASE none IPR003698
PANTHER 49 114 66 PTHR10949:SF8 none none none
Gene3D 35 114 80 G3DSA:2.30.30.50 none none none

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting