Protein : Qrob_P0119270.2 Q. robur
Protein Identifier  ? Qrob_P0119270.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=7) 4.2.3.46 - Alpha-farnesene synthase. Code Enzyme  EC:4.2.3.46
Gene Prediction Quality  validated Protein length 

Sequence

Length: 234  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0010333 terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0011s03440g 1 214 + 214 Gaps:3 37.07 580 61.86 2e-89 POPTRDRAFT_568383 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10014790mg 1 217 + 217 Gaps:1 38.92 555 63.43 2e-89 hypothetical protein
blastp_kegg lcl|cit:102625123 1 217 + 217 Gaps:1 35.70 605 63.43 8e-89 alpha-farnesene synthase-like
blastp_kegg lcl|cit:102618658 1 217 + 217 Gaps:1 37.70 573 62.96 2e-88 alpha-farnesene synthase-like
blastp_kegg lcl|mdm:103446592 1 214 + 214 Gaps:3 37.33 576 62.33 5e-86 AFAR AFS AFS1 MdAFS1 MdASF1 eafar (E E)-alpha-farnesene synthase (EC:4.2.3.46)
blastp_kegg lcl|tcc:TCM_030070 1 214 + 214 Gaps:1 32.14 669 59.07 1e-83 E E-alpha-farnesene synthase putative
blastp_kegg lcl|mtr:MTR_7g010710 1 214 + 214 Gaps:1 38.52 553 60.09 1e-83 (E E)-alpha-farnesene synthase
blastp_kegg lcl|vvi:100240859 1 214 + 214 Gaps:2 41.31 518 61.68 5e-83 (E E)-alpha-farnesene synthase-like
blastp_kegg lcl|vvi:100853475 1 214 + 214 Gaps:2 41.39 517 60.75 3e-82 (E E)-alpha-farnesene synthase-like
blastp_kegg lcl|pper:PRUPE_ppa003423mg 1 214 + 214 Gaps:4 37.57 575 60.19 1e-81 hypothetical protein
blastp_pdb 3n0g_B 1 214 + 214 Gaps:2 38.20 555 41.98 3e-51 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0g_A 1 214 + 214 Gaps:2 38.20 555 41.98 3e-51 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_B 1 214 + 214 Gaps:2 38.20 555 41.98 3e-51 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_A 1 214 + 214 Gaps:2 38.20 555 41.98 3e-51 mol:protein length:555 Isoprene synthase
blastp_pdb 2onh_B 1 215 + 215 Gaps:3 39.41 543 39.25 2e-47 mol:protein length:543 4S-limonene synthase
blastp_pdb 2onh_A 1 215 + 215 Gaps:3 39.41 543 39.25 2e-47 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_B 1 215 + 215 Gaps:3 39.41 543 39.25 2e-47 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_A 1 215 + 215 Gaps:3 39.41 543 39.25 2e-47 mol:protein length:543 4S-limonene synthase
blastp_pdb 1n24_B 1 215 + 215 Gaps:3 38.98 549 40.65 5e-43 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n24_A 1 215 + 215 Gaps:3 38.98 549 40.65 5e-43 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_uniprot_sprot sp|Q84LB2|AFS1_MALDO 1 214 + 214 Gaps:3 37.33 576 62.33 2e-87 (E E)-alpha-farnesene synthase OS Malus domestica GN AFS1 PE 1 SV 2
blastp_uniprot_sprot sp|B9RXW0|TPS7_RICCO 1 214 + 214 Gaps:3 38.12 564 58.14 5e-78 Alpha-farnesene synthase OS Ricinus communis GN TPS7 PE 1 SV 2
blastp_uniprot_sprot sp|B9T536|TPS10_RICCO 1 214 + 214 Gaps:3 38.66 551 46.95 1e-61 Terpene synthase 10 OS Ricinus communis GN TPS10 PE 2 SV 1
blastp_uniprot_sprot sp|Q6PWU2|ATESY_VITVI 1 219 + 219 Gaps:3 36.95 590 46.79 4e-61 (-)-alpha-terpineol synthase OS Vitis vinifera PE 1 SV 1
blastp_uniprot_sprot sp|Q93X23|MYRS_QUEIL 1 219 + 219 Gaps:2 36.35 597 47.00 1e-58 Myrcene synthase chloroplastic OS Quercus ilex PE 1 SV 1
blastp_uniprot_sprot sp|Q8L5K4|GTPS_CITLI 1 214 + 214 Gaps:3 35.50 600 45.54 3e-58 Gamma-terpinene synthase chloroplastic OS Citrus limon PE 1 SV 1
blastp_uniprot_sprot sp|B3TPQ7|ATESY_MAGGA 1 214 + 214 Gaps:4 35.81 592 47.64 7e-57 Alpha-terpineol synthase chloroplastic OS Magnolia grandiflora PE 1 SV 1
blastp_uniprot_sprot sp|Q672F7|TPS2_LOTJA 1 214 + 214 Gaps:2 35.63 595 43.87 3e-54 Tricyclene synthase EBOS chloroplastic OS Lotus japonicus GN EBOS PE 1 SV 1
blastp_uniprot_sprot sp|Q8GUE4|GERS_CINTE 1 214 + 214 Gaps:7 35.66 603 43.72 7e-52 Geraniol synthase chloroplastic OS Cinnamomum tenuipile GN GerS PE 1 SV 2
blastp_uniprot_sprot sp|G1JUH1|TPS3_SOLLC 1 217 + 217 Gaps:4 35.75 607 42.40 2e-51 (-)-camphene/tricyclene synthase chloroplastic OS Solanum lycopersicum GN TPS3 PE 1 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 1 161 161 PF03936 none Terpene synthase family, metal binding domain IPR005630
SUPERFAMILY 1 214 214 SSF48576 none none IPR008949
Gene3D 1 214 214 G3DSA:1.10.600.10 none none IPR008949
PANTHER 1 216 216 PTHR31225 none none none
PANTHER 1 216 216 PTHR31225:SF0 none none none

0 Localization

0 Qtllist

0 Targeting