Protein : Qrob_P0119260.2 Q. robur
Protein Identifier  ? Qrob_P0119260.2 Organism . Name  Quercus robur
Score  35.3 Score Type  egn
Protein Description  (M=7) 4.2.3.46 - Alpha-farnesene synthase. Code Enzyme  EC:4.2.3.46
Gene Prediction Quality  validated Protein length 

Sequence

Length: 365  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0010333 terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0906600 8 339 + 332 Gaps:6 63.34 521 59.09 2e-130 (R)-limonene synthase putative (EC:4.2.3.20)
blastp_kegg lcl|cit:102618658 15 345 + 331 Gaps:2 58.12 573 57.66 5e-129 alpha-farnesene synthase-like
blastp_kegg lcl|pop:POPTR_0011s03440g 1 339 + 339 Gaps:11 59.31 580 58.43 5e-129 POPTRDRAFT_568383 hypothetical protein
blastp_kegg lcl|cit:102625123 15 345 + 331 Gaps:2 55.04 605 57.96 1e-128 alpha-farnesene synthase-like
blastp_kegg lcl|cic:CICLE_v10014790mg 18 345 + 328 Gaps:2 59.46 555 58.18 2e-128 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa003423mg 1 339 + 339 Gaps:12 60.00 575 58.55 5e-126 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa024769mg 21 339 + 319 Gaps:5 57.81 557 59.63 2e-125 hypothetical protein
blastp_kegg lcl|mdm:103446592 19 339 + 321 Gaps:8 56.42 576 62.15 1e-124 AFAR AFS AFS1 MdAFS1 MdASF1 eafar (E E)-alpha-farnesene synthase (EC:4.2.3.46)
blastp_kegg lcl|tcc:TCM_030070 2 338 + 337 Gaps:2 50.37 669 56.68 3e-123 E E-alpha-farnesene synthase putative
blastp_kegg lcl|pmum:103324592 1 339 + 339 Gaps:8 59.79 577 56.81 6e-123 (E E)-alpha-farnesene synthase-like
blastp_pdb 3n0g_B 29 339 + 311 Gaps:3 56.22 555 48.72 4e-87 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0g_A 29 339 + 311 Gaps:3 56.22 555 48.72 4e-87 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_B 29 339 + 311 Gaps:3 56.22 555 48.72 4e-87 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_A 29 339 + 311 Gaps:3 56.22 555 48.72 4e-87 mol:protein length:555 Isoprene synthase
blastp_pdb 1n24_B 29 346 + 318 Gaps:9 59.20 549 42.15 1e-73 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n24_A 29 346 + 318 Gaps:9 59.20 549 42.15 1e-73 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n23_B 29 346 + 318 Gaps:9 59.20 549 42.15 1e-73 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n23_A 29 346 + 318 Gaps:9 59.20 549 42.15 1e-73 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n22_B 29 346 + 318 Gaps:9 59.20 549 42.15 1e-73 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n22_A 29 346 + 318 Gaps:9 59.20 549 42.15 1e-73 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_uniprot_sprot sp|B9RXW0|TPS7_RICCO 8 339 + 332 Gaps:6 58.51 564 59.09 2e-131 Alpha-farnesene synthase OS Ricinus communis GN TPS7 PE 1 SV 2
blastp_uniprot_sprot sp|Q84LB2|AFS1_MALDO 19 339 + 321 Gaps:8 56.42 576 62.15 2e-126 (E E)-alpha-farnesene synthase OS Malus domestica GN AFS1 PE 1 SV 2
blastp_uniprot_sprot sp|B3TPQ7|ATESY_MAGGA 11 339 + 329 Gaps:4 54.90 592 48.92 5e-95 Alpha-terpineol synthase chloroplastic OS Magnolia grandiflora PE 1 SV 1
blastp_uniprot_sprot sp|B9T536|TPS10_RICCO 29 339 + 311 Gaps:3 56.62 551 50.32 2e-90 Terpene synthase 10 OS Ricinus communis GN TPS10 PE 2 SV 1
blastp_uniprot_sprot sp|Q50L36|ISPS_POPAL 11 339 + 329 Gaps:4 55.63 595 48.34 9e-88 Isoprene synthase chloroplastic OS Populus alba GN ISPS PE 1 SV 1
blastp_uniprot_sprot sp|Q672F7|TPS2_LOTJA 28 337 + 310 Gaps:8 51.76 595 51.62 1e-87 Tricyclene synthase EBOS chloroplastic OS Lotus japonicus GN EBOS PE 1 SV 1
blastp_uniprot_sprot sp|Q7XAS7|ISPS_POPTM 11 339 + 329 Gaps:4 55.63 595 48.04 3e-87 Isoprene synthase chloroplastic OS Populus tremuloides GN ISPS PE 3 SV 1
blastp_uniprot_sprot sp|Q6PWU2|ATESY_VITVI 6 339 + 334 Gaps:12 58.31 590 45.06 6e-87 (-)-alpha-terpineol synthase OS Vitis vinifera PE 1 SV 1
blastp_uniprot_sprot sp|Q9AR86|ISPS_POPCN 11 339 + 329 Gaps:4 55.63 595 47.73 8e-87 Isoprene synthase chloroplastic OS Populus canescens GN ISPS PE 1 SV 1
blastp_uniprot_sprot sp|Q93X23|MYRS_QUEIL 29 339 + 311 Gaps:3 52.26 597 48.08 2e-86 Myrcene synthase chloroplastic OS Quercus ilex PE 1 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 5 339 335 PTHR31225:SF0 none none none
Pfam 242 348 107 PF03936 none Terpene synthase family, metal binding domain IPR005630
Pfam 39 212 174 PF01397 none Terpene synthase, N-terminal domain IPR001906
Gene3D 55 252 198 G3DSA:1.50.30.10 none none IPR001906
PANTHER 5 339 335 PTHR31225 none none none
SUPERFAMILY 38 235 198 SSF48239 none none IPR008930
Gene3D 253 346 94 G3DSA:1.10.600.10 none none IPR008949
SUPERFAMILY 239 340 102 SSF48576 none none IPR008949

0 Localization

0 Qtllist

0 Targeting