Protein : Qrob_P0119250.2 Q. robur
Protein Identifier  ? Qrob_P0119250.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K14173 - alpha-farnesene synthase [EC:4.2.3.46] Code Enzyme  EC:4.2.3.46
Gene Prediction Quality  validated Protein length 

Sequence

Length: 585  
Kegg Orthology  K14173
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0010333 terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0011s03440g 1 565 + 565 Gaps:14 98.45 580 60.07 0.0 POPTRDRAFT_568383 hypothetical protein
blastp_kegg lcl|cit:102625123 15 568 + 554 Gaps:3 91.74 605 60.54 0.0 alpha-farnesene synthase-like
blastp_kegg lcl|cic:CICLE_v10014790mg 18 568 + 551 Gaps:3 99.46 555 60.69 0.0 hypothetical protein
blastp_kegg lcl|cit:102618658 15 568 + 554 Gaps:3 96.86 573 60.18 0.0 alpha-farnesene synthase-like
blastp_kegg lcl|mdm:103446592 19 565 + 547 Gaps:11 95.83 576 62.50 0.0 AFAR AFS AFS1 MdAFS1 MdASF1 eafar (E E)-alpha-farnesene synthase (EC:4.2.3.46)
blastp_kegg lcl|pper:PRUPE_ppa003423mg 1 565 + 565 Gaps:16 99.65 575 60.03 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_030070 2 565 + 564 Gaps:3 84.45 669 58.05 0.0 E E-alpha-farnesene synthase putative
blastp_kegg lcl|pmum:103324592 1 565 + 565 Gaps:14 99.65 577 58.96 0.0 (E E)-alpha-farnesene synthase-like
blastp_kegg lcl|fve:101301453 1 566 + 566 Gaps:25 100.00 583 57.98 0.0 (E E)-alpha-farnesene synthase-like
blastp_kegg lcl|vvi:100246686 1 566 + 566 Gaps:5 99.65 569 58.20 0.0 (E E)-alpha-farnesene synthase-like
blastp_pdb 3n0g_B 29 565 + 537 Gaps:5 96.58 555 45.71 1e-156 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0g_A 29 565 + 537 Gaps:5 96.58 555 45.71 1e-156 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_B 29 565 + 537 Gaps:5 96.58 555 45.71 1e-156 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_A 29 565 + 537 Gaps:5 96.58 555 45.71 1e-156 mol:protein length:555 Isoprene synthase
blastp_pdb 2onh_B 29 566 + 538 Gaps:10 99.82 543 40.41 1e-137 mol:protein length:543 4S-limonene synthase
blastp_pdb 2onh_A 29 566 + 538 Gaps:10 99.82 543 40.41 1e-137 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_B 29 566 + 538 Gaps:10 99.82 543 40.41 1e-137 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_A 29 566 + 538 Gaps:10 99.82 543 40.41 1e-137 mol:protein length:543 4S-limonene synthase
blastp_pdb 1n24_B 29 566 + 538 Gaps:12 99.09 549 41.54 2e-134 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_pdb 1n24_A 29 566 + 538 Gaps:12 99.09 549 41.54 2e-134 mol:protein length:549 (+)-bornyl diphosphate synthase
blastp_uniprot_sprot sp|Q84LB2|AFS1_MALDO 19 565 + 547 Gaps:11 95.83 576 62.50 0.0 (E E)-alpha-farnesene synthase OS Malus domestica GN AFS1 PE 1 SV 2
blastp_uniprot_sprot sp|B9RXW0|TPS7_RICCO 8 565 + 558 Gaps:9 98.76 564 58.53 0.0 Alpha-farnesene synthase OS Ricinus communis GN TPS7 PE 1 SV 2
blastp_uniprot_sprot sp|B9T536|TPS10_RICCO 29 566 + 538 Gaps:6 97.64 551 48.88 6e-173 Terpene synthase 10 OS Ricinus communis GN TPS10 PE 2 SV 1
blastp_uniprot_sprot sp|B3TPQ7|ATESY_MAGGA 21 565 + 545 Gaps:5 91.55 592 48.34 2e-172 Alpha-terpineol synthase chloroplastic OS Magnolia grandiflora PE 1 SV 1
blastp_uniprot_sprot sp|Q6PWU2|ATESY_VITVI 6 570 + 565 Gaps:15 97.29 590 45.82 1e-167 (-)-alpha-terpineol synthase OS Vitis vinifera PE 1 SV 1
blastp_uniprot_sprot sp|Q93X23|MYRS_QUEIL 29 570 + 542 Gaps:5 90.62 597 47.32 1e-164 Myrcene synthase chloroplastic OS Quercus ilex PE 1 SV 1
blastp_uniprot_sprot sp|Q672F7|TPS2_LOTJA 28 565 + 538 Gaps:10 89.75 595 48.31 3e-162 Tricyclene synthase EBOS chloroplastic OS Lotus japonicus GN EBOS PE 1 SV 1
blastp_uniprot_sprot sp|Q50L36|ISPS_POPAL 11 565 + 555 Gaps:6 93.28 595 45.59 8e-157 Isoprene synthase chloroplastic OS Populus alba GN ISPS PE 1 SV 1
blastp_uniprot_sprot sp|Q7XAS7|ISPS_POPTM 11 565 + 555 Gaps:6 93.28 595 45.41 1e-156 Isoprene synthase chloroplastic OS Populus tremuloides GN ISPS PE 3 SV 1
blastp_uniprot_sprot sp|Q8L5K4|GTPS_CITLI 6 566 + 561 Gaps:25 94.33 600 45.23 2e-155 Gamma-terpinene synthase chloroplastic OS Citrus limon PE 1 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 238 565 328 SSF48576 none none IPR008949
PANTHER 5 567 563 PTHR31225 none none none
Gene3D 55 252 198 G3DSA:1.50.30.10 none none IPR001906
Pfam 39 212 174 PF01397 none Terpene synthase, N-terminal domain IPR001906
PANTHER 5 567 563 PTHR31225:SF0 none none none
SUPERFAMILY 38 235 198 SSF48239 none none IPR008930
Pfam 242 512 271 PF03936 none Terpene synthase family, metal binding domain IPR005630
Gene3D 253 565 313 G3DSA:1.10.600.10 none none IPR008949

0 Localization

0 Qtllist

0 Targeting