Protein : Qrob_P0119240.2 Q. robur
Protein Identifier  ? Qrob_P0119240.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=7) 4.2.3.46 - Alpha-farnesene synthase. Code Enzyme  EC:4.2.3.46
Gene Prediction Quality  validated Protein length 

Sequence

Length: 452  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0010333 terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0011s03440g 7 441 + 435 Gaps:31 78.97 580 57.42 1e-171 POPTRDRAFT_568383 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa003423mg 8 448 + 441 Gaps:28 79.48 575 55.58 7e-167 hypothetical protein
blastp_kegg lcl|pmum:103324592 5 448 + 444 Gaps:28 79.72 577 54.78 7e-165 (E E)-alpha-farnesene synthase-like
blastp_kegg lcl|pper:PRUPE_ppa024769mg 5 441 + 437 Gaps:24 82.41 557 55.56 4e-164 hypothetical protein
blastp_kegg lcl|mdm:103446592 6 448 + 443 Gaps:31 79.51 576 56.11 2e-162 AFAR AFS AFS1 MdAFS1 MdASF1 eafar (E E)-alpha-farnesene synthase (EC:4.2.3.46)
blastp_kegg lcl|vvi:100240859 6 439 + 434 Gaps:21 87.45 518 55.85 4e-161 (E E)-alpha-farnesene synthase-like
blastp_kegg lcl|vvi:100246686 6 439 + 434 Gaps:21 79.61 569 56.07 1e-160 (E E)-alpha-farnesene synthase-like
blastp_kegg lcl|pmum:103325630 6 448 + 443 Gaps:30 82.13 554 55.82 7e-160 (E E)-alpha-farnesene synthase-like
blastp_kegg lcl|fve:101301453 6 448 + 443 Gaps:38 79.76 583 55.05 2e-156 (E E)-alpha-farnesene synthase-like
blastp_kegg lcl|cic:CICLE_v10014790mg 12 442 + 431 Gaps:19 81.08 555 53.11 5e-156 hypothetical protein
blastp_pdb 3n0g_B 9 441 + 433 Gaps:23 81.08 555 43.56 5e-115 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0g_A 9 441 + 433 Gaps:23 81.08 555 43.56 5e-115 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_B 9 441 + 433 Gaps:23 81.08 555 43.56 5e-115 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_A 9 441 + 433 Gaps:23 81.08 555 43.56 5e-115 mol:protein length:555 Isoprene synthase
blastp_pdb 2j5c_B 12 451 + 440 Gaps:26 79.09 569 40.22 9e-105 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_pdb 2j5c_A 12 451 + 440 Gaps:26 79.09 569 40.22 9e-105 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_pdb 2onh_B 12 441 + 430 Gaps:25 83.06 543 39.47 5e-100 mol:protein length:543 4S-limonene synthase
blastp_pdb 2onh_A 12 441 + 430 Gaps:25 83.06 543 39.47 5e-100 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_B 12 441 + 430 Gaps:25 83.06 543 39.47 5e-100 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_A 12 441 + 430 Gaps:25 83.06 543 39.47 5e-100 mol:protein length:543 4S-limonene synthase
blastp_uniprot_sprot sp|Q84LB2|AFS1_MALDO 6 448 + 443 Gaps:31 79.51 576 56.11 6e-164 (E E)-alpha-farnesene synthase OS Malus domestica GN AFS1 PE 1 SV 2
blastp_uniprot_sprot sp|B9RXW0|TPS7_RICCO 7 439 + 433 Gaps:22 80.32 564 52.76 5e-153 Alpha-farnesene synthase OS Ricinus communis GN TPS7 PE 1 SV 2
blastp_uniprot_sprot sp|B3TPQ7|ATESY_MAGGA 9 439 + 431 Gaps:20 75.51 592 46.09 2e-122 Alpha-terpineol synthase chloroplastic OS Magnolia grandiflora PE 1 SV 1
blastp_uniprot_sprot sp|Q6PWU2|ATESY_VITVI 6 442 + 437 Gaps:21 76.95 590 45.15 3e-118 (-)-alpha-terpineol synthase OS Vitis vinifera PE 1 SV 1
blastp_uniprot_sprot sp|B9T536|TPS10_RICCO 11 441 + 431 Gaps:21 81.31 551 44.64 1e-115 Terpene synthase 10 OS Ricinus communis GN TPS10 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XAS7|ISPS_POPTM 12 441 + 430 Gaps:23 75.13 595 43.85 3e-113 Isoprene synthase chloroplastic OS Populus tremuloides GN ISPS PE 3 SV 1
blastp_uniprot_sprot sp|Q50L36|ISPS_POPAL 9 441 + 433 Gaps:23 75.63 595 43.56 4e-113 Isoprene synthase chloroplastic OS Populus alba GN ISPS PE 1 SV 1
blastp_uniprot_sprot sp|Q9AR86|ISPS_POPCN 9 441 + 433 Gaps:23 75.63 595 43.33 4e-113 Isoprene synthase chloroplastic OS Populus canescens GN ISPS PE 1 SV 1
blastp_uniprot_sprot sp|Q5UB07|TPS4_MEDTR 9 441 + 433 Gaps:24 77.41 580 44.54 5e-113 Tricyclene synthase TPS4 chloroplastic OS Medicago truncatula GN TPS4 PE 1 SV 1
blastp_uniprot_sprot sp|Q672F7|TPS2_LOTJA 9 441 + 433 Gaps:24 75.13 595 44.74 9e-113 Tricyclene synthase EBOS chloroplastic OS Lotus japonicus GN EBOS PE 1 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 33 445 413 PTHR31225:SF0 none none none
SUPERFAMILY 192 445 254 SSF48576 none none IPR008949
Gene3D 206 445 240 G3DSA:1.10.600.10 none none IPR008949
Pfam 195 444 250 PF03936 none Terpene synthase family, metal binding domain IPR005630
PANTHER 33 445 413 PTHR31225 none none none
Pfam 7 163 157 PF01397 none Terpene synthase, N-terminal domain IPR001906
SUPERFAMILY 7 190 184 SSF48239 none none IPR008930
Gene3D 8 205 198 G3DSA:1.50.30.10 none none IPR001906

0 Localization

0 Qtllist

0 Targeting