Protein : Qrob_P0119230.2 Q. robur
Protein Identifier  ? Qrob_P0119230.2 Organism . Name  Quercus robur
Score  82.1 Score Type  egn
Protein Description  (M=2) K14173 - alpha-farnesene synthase [EC:4.2.3.46] Code Enzyme  EC:4.2.3.46
Gene Prediction Quality  validated Protein length 

Sequence

Length: 572  
Kegg Orthology  K14173
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0010333 terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0011s03440g 1 563 + 563 Gaps:16 98.45 580 60.95 0.0 POPTRDRAFT_568383 hypothetical protein
blastp_kegg lcl|cit:102618658 1 566 + 566 Gaps:6 99.48 573 60.00 0.0 alpha-farnesene synthase-like
blastp_kegg lcl|cic:CICLE_v10014790mg 18 566 + 549 Gaps:5 99.46 555 61.23 0.0 hypothetical protein
blastp_kegg lcl|cit:102625123 15 566 + 552 Gaps:5 91.74 605 61.08 0.0 alpha-farnesene synthase-like
blastp_kegg lcl|mdm:103446592 6 563 + 558 Gaps:11 98.44 576 60.85 0.0 AFAR AFS AFS1 MdAFS1 MdASF1 eafar (E E)-alpha-farnesene synthase (EC:4.2.3.46)
blastp_kegg lcl|pper:PRUPE_ppa003423mg 1 563 + 563 Gaps:16 99.65 575 59.86 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_030070 2 563 + 562 Gaps:3 84.45 669 57.52 0.0 E E-alpha-farnesene synthase putative
blastp_kegg lcl|pmum:103324592 1 563 + 563 Gaps:14 99.65 577 58.78 0.0 (E E)-alpha-farnesene synthase-like
blastp_kegg lcl|vvi:100246686 1 564 + 564 Gaps:7 99.65 569 59.08 0.0 (E E)-alpha-farnesene synthase-like
blastp_kegg lcl|pper:PRUPE_ppa024769mg 21 563 + 543 Gaps:11 98.74 557 59.64 0.0 hypothetical protein
blastp_pdb 3n0g_B 29 563 + 535 Gaps:13 96.58 555 45.15 1e-153 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0g_A 29 563 + 535 Gaps:13 96.58 555 45.15 1e-153 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_B 29 563 + 535 Gaps:13 96.58 555 45.15 1e-153 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_A 29 563 + 535 Gaps:13 96.58 555 45.15 1e-153 mol:protein length:555 Isoprene synthase
blastp_pdb 2onh_B 29 564 + 536 Gaps:12 99.82 543 39.48 1e-132 mol:protein length:543 4S-limonene synthase
blastp_pdb 2onh_A 29 564 + 536 Gaps:12 99.82 543 39.48 1e-132 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_B 29 564 + 536 Gaps:12 99.82 543 39.48 1e-132 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_A 29 564 + 536 Gaps:12 99.82 543 39.48 1e-132 mol:protein length:543 4S-limonene synthase
blastp_pdb 2j5c_B 30 559 + 530 Gaps:9 92.97 569 39.32 3e-129 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_pdb 2j5c_A 30 559 + 530 Gaps:9 92.97 569 39.32 3e-129 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_uniprot_sprot sp|Q84LB2|AFS1_MALDO 6 563 + 558 Gaps:11 98.44 576 60.85 0.0 (E E)-alpha-farnesene synthase OS Malus domestica GN AFS1 PE 1 SV 2
blastp_uniprot_sprot sp|B9RXW0|TPS7_RICCO 11 563 + 553 Gaps:6 98.76 564 58.71 0.0 Alpha-farnesene synthase OS Ricinus communis GN TPS7 PE 1 SV 2
blastp_uniprot_sprot sp|B3TPQ7|ATESY_MAGGA 21 563 + 543 Gaps:5 91.55 592 48.15 6e-172 Alpha-terpineol synthase chloroplastic OS Magnolia grandiflora PE 1 SV 1
blastp_uniprot_sprot sp|B9T536|TPS10_RICCO 29 564 + 536 Gaps:8 97.64 551 48.51 2e-171 Terpene synthase 10 OS Ricinus communis GN TPS10 PE 2 SV 1
blastp_uniprot_sprot sp|Q6PWU2|ATESY_VITVI 6 568 + 563 Gaps:17 97.29 590 45.82 4e-167 (-)-alpha-terpineol synthase OS Vitis vinifera PE 1 SV 1
blastp_uniprot_sprot sp|Q93X23|MYRS_QUEIL 29 563 + 535 Gaps:7 89.78 597 47.01 2e-162 Myrcene synthase chloroplastic OS Quercus ilex PE 1 SV 1
blastp_uniprot_sprot sp|Q672F7|TPS2_LOTJA 26 563 + 538 Gaps:12 90.08 595 47.57 1e-159 Tricyclene synthase EBOS chloroplastic OS Lotus japonicus GN EBOS PE 1 SV 1
blastp_uniprot_sprot sp|Q8L5K4|GTPS_CITLI 6 563 + 558 Gaps:27 94.17 600 44.78 7e-154 Gamma-terpinene synthase chloroplastic OS Citrus limon PE 1 SV 1
blastp_uniprot_sprot sp|Q7XAS7|ISPS_POPTM 29 563 + 535 Gaps:13 90.08 595 45.34 4e-153 Isoprene synthase chloroplastic OS Populus tremuloides GN ISPS PE 3 SV 1
blastp_uniprot_sprot sp|Q50L36|ISPS_POPAL 9 563 + 555 Gaps:19 92.44 595 45.09 6e-153 Isoprene synthase chloroplastic OS Populus alba GN ISPS PE 1 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 240 510 271 PF03936 none Terpene synthase family, metal binding domain IPR005630
Pfam 39 210 172 PF01397 none Terpene synthase, N-terminal domain IPR001906
PANTHER 5 565 561 PTHR31225:SF0 none none none
Gene3D 251 563 313 G3DSA:1.10.600.10 none none IPR008949
Gene3D 55 250 196 G3DSA:1.50.30.10 none none IPR001906
PANTHER 5 565 561 PTHR31225 none none none
SUPERFAMILY 236 563 328 SSF48576 none none IPR008949
SUPERFAMILY 35 235 201 SSF48239 none none IPR008930

0 Localization

0 Qtllist

0 Targeting