Protein : Qrob_P0119200.2 Q. robur
Protein Identifier  ? Qrob_P0119200.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=7) 4.2.3.46 - Alpha-farnesene synthase. Code Enzyme  EC:4.2.3.46
Gene Prediction Quality  validated Protein length 

Sequence

Length: 567  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0010333 terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0011s03440g 1 565 + 565 Gaps:16 98.79 580 60.56 0.0 POPTRDRAFT_568383 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa003423mg 1 565 + 565 Gaps:12 100.00 575 58.09 0.0 hypothetical protein
blastp_kegg lcl|pmum:103324592 1 565 + 565 Gaps:14 100.00 577 57.89 0.0 (E E)-alpha-farnesene synthase-like
blastp_kegg lcl|mdm:103446592 1 564 + 564 Gaps:17 99.83 576 58.43 0.0 AFAR AFS AFS1 MdAFS1 MdASF1 eafar (E E)-alpha-farnesene synthase (EC:4.2.3.46)
blastp_kegg lcl|pper:PRUPE_ppa024769mg 22 565 + 544 Gaps:11 98.92 557 58.80 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_030070 6 565 + 560 Gaps:5 84.16 669 57.02 0.0 E E-alpha-farnesene synthase putative
blastp_kegg lcl|fve:101301453 29 563 + 535 Gaps:18 93.83 583 59.78 0.0 (E E)-alpha-farnesene synthase-like
blastp_kegg lcl|cit:102618658 1 562 + 562 Gaps:4 98.78 573 56.18 0.0 alpha-farnesene synthase-like
blastp_kegg lcl|cit:102625123 1 562 + 562 Gaps:4 93.55 605 56.18 0.0 alpha-farnesene synthase-like
blastp_kegg lcl|cic:CICLE_v10014790mg 19 562 + 544 Gaps:3 98.56 555 56.86 0.0 hypothetical protein
blastp_pdb 3n0g_B 29 566 + 538 Gaps:13 97.12 555 44.90 3e-154 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0g_A 29 566 + 538 Gaps:13 97.12 555 44.90 3e-154 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_B 29 566 + 538 Gaps:13 97.12 555 44.90 3e-154 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_A 29 566 + 538 Gaps:13 97.12 555 44.90 3e-154 mol:protein length:555 Isoprene synthase
blastp_pdb 2j5c_B 30 563 + 534 Gaps:5 93.67 569 39.77 1e-136 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_pdb 2j5c_A 30 563 + 534 Gaps:5 93.67 569 39.77 1e-136 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_pdb 2onh_B 29 563 + 535 Gaps:10 99.63 543 40.48 1e-136 mol:protein length:543 4S-limonene synthase
blastp_pdb 2onh_A 29 563 + 535 Gaps:10 99.63 543 40.48 1e-136 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_B 29 563 + 535 Gaps:10 99.63 543 40.48 1e-136 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_A 29 563 + 535 Gaps:10 99.63 543 40.48 1e-136 mol:protein length:543 4S-limonene synthase
blastp_uniprot_sprot sp|Q84LB2|AFS1_MALDO 1 564 + 564 Gaps:17 99.83 576 58.43 0.0 (E E)-alpha-farnesene synthase OS Malus domestica GN AFS1 PE 1 SV 2
blastp_uniprot_sprot sp|B9RXW0|TPS7_RICCO 11 565 + 555 Gaps:6 99.11 564 56.35 0.0 Alpha-farnesene synthase OS Ricinus communis GN TPS7 PE 1 SV 2
blastp_uniprot_sprot sp|B3TPQ7|ATESY_MAGGA 18 565 + 548 Gaps:3 92.40 592 46.80 1e-166 Alpha-terpineol synthase chloroplastic OS Magnolia grandiflora PE 1 SV 1
blastp_uniprot_sprot sp|B9T536|TPS10_RICCO 18 562 + 545 Gaps:6 99.27 551 46.62 6e-163 Terpene synthase 10 OS Ricinus communis GN TPS10 PE 2 SV 1
blastp_uniprot_sprot sp|Q6PWU2|ATESY_VITVI 29 563 + 535 Gaps:7 90.85 590 47.20 3e-162 (-)-alpha-terpineol synthase OS Vitis vinifera PE 1 SV 1
blastp_uniprot_sprot sp|Q672F7|TPS2_LOTJA 22 565 + 544 Gaps:8 91.09 595 46.86 5e-159 Tricyclene synthase EBOS chloroplastic OS Lotus japonicus GN EBOS PE 1 SV 1
blastp_uniprot_sprot sp|Q7XAS7|ISPS_POPTM 5 566 + 562 Gaps:19 95.63 595 43.94 7e-154 Isoprene synthase chloroplastic OS Populus tremuloides GN ISPS PE 3 SV 1
blastp_uniprot_sprot sp|Q50L36|ISPS_POPAL 5 566 + 562 Gaps:19 95.63 595 43.94 1e-153 Isoprene synthase chloroplastic OS Populus alba GN ISPS PE 1 SV 1
blastp_uniprot_sprot sp|Q8GUE4|GERS_CINTE 29 563 + 535 Gaps:7 88.89 603 44.96 4e-153 Geraniol synthase chloroplastic OS Cinnamomum tenuipile GN GerS PE 1 SV 2
blastp_uniprot_sprot sp|Q93X23|MYRS_QUEIL 29 565 + 537 Gaps:5 90.12 597 45.17 1e-152 Myrcene synthase chloroplastic OS Quercus ilex PE 1 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 39 211 173 PF01397 none Terpene synthase, N-terminal domain IPR001906
Pfam 242 511 270 PF03936 none Terpene synthase family, metal binding domain IPR005630
Gene3D 55 252 198 G3DSA:1.50.30.10 none none IPR001906
PANTHER 5 565 561 PTHR31225 none none none
SUPERFAMILY 35 237 203 SSF48239 none none IPR008930
SUPERFAMILY 238 563 326 SSF48576 none none IPR008949
Gene3D 253 563 311 G3DSA:1.10.600.10 none none IPR008949
PANTHER 5 565 561 PTHR31225:SF0 none none none

0 Localization

0 Qtllist

0 Targeting