Protein : Qrob_P0119190.2 Q. robur
Protein Identifier  ? Qrob_P0119190.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=7) 4.2.3.46 - Alpha-farnesene synthase. Code Enzyme  EC:4.2.3.46
Gene Prediction Quality  validated Protein length 

Sequence

Length: 225  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0010333 terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0011s03440g 21 223 + 203 Gaps:65 46.21 580 46.64 3e-63 POPTRDRAFT_568383 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10014790mg 23 220 + 198 Gaps:63 47.03 555 44.83 8e-58 hypothetical protein
blastp_kegg lcl|cit:102625123 23 220 + 198 Gaps:63 43.14 605 44.83 2e-57 alpha-farnesene synthase-like
blastp_kegg lcl|pvu:PHAVU_011G013600g 23 221 + 199 Gaps:66 47.41 559 42.64 2e-57 hypothetical protein
blastp_kegg lcl|cit:102618658 23 220 + 198 Gaps:63 45.55 573 44.83 3e-57 alpha-farnesene synthase-like
blastp_kegg lcl|mdm:103446592 21 222 + 202 Gaps:65 46.35 576 42.32 2e-56 AFAR AFS AFS1 MdAFS1 MdASF1 eafar (E E)-alpha-farnesene synthase (EC:4.2.3.46)
blastp_kegg lcl|fve:101301453 23 221 + 199 Gaps:66 44.77 583 42.53 4e-56 (E E)-alpha-farnesene synthase-like
blastp_kegg lcl|mtr:MTR_7g010710 23 221 + 199 Gaps:63 47.38 553 42.37 4e-55 (E E)-alpha-farnesene synthase
blastp_kegg lcl|tcc:TCM_030070 23 223 + 201 Gaps:65 39.76 669 41.35 1e-54 E E-alpha-farnesene synthase putative
blastp_kegg lcl|pper:PRUPE_ppa024025mg 21 223 + 203 Gaps:69 66.50 406 42.22 2e-53 hypothetical protein
blastp_pdb 2onh_B 24 221 + 198 Gaps:63 48.07 543 29.50 1e-26 mol:protein length:543 4S-limonene synthase
blastp_pdb 2onh_A 24 221 + 198 Gaps:63 48.07 543 29.50 1e-26 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_B 24 221 + 198 Gaps:63 48.07 543 29.50 1e-26 mol:protein length:543 4S-limonene synthase
blastp_pdb 2ong_A 24 221 + 198 Gaps:63 48.07 543 29.50 1e-26 mol:protein length:543 4S-limonene synthase
blastp_pdb 2j5c_B 24 221 + 198 Gaps:62 45.69 569 28.46 1e-25 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_pdb 2j5c_A 24 221 + 198 Gaps:62 45.69 569 28.46 1e-25 mol:protein length:569 1 8-CINEOLE SYNTHASE
blastp_pdb 3n0g_B 24 224 + 201 Gaps:64 47.39 555 28.90 4e-25 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0g_A 24 224 + 201 Gaps:64 47.39 555 28.90 4e-25 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_B 24 224 + 201 Gaps:64 47.39 555 28.90 4e-25 mol:protein length:555 Isoprene synthase
blastp_pdb 3n0f_A 24 224 + 201 Gaps:64 47.39 555 28.90 4e-25 mol:protein length:555 Isoprene synthase
blastp_uniprot_sprot sp|B9RXW0|TPS7_RICCO 21 223 + 203 Gaps:65 47.52 564 45.52 2e-67 Alpha-farnesene synthase OS Ricinus communis GN TPS7 PE 1 SV 2
blastp_uniprot_sprot sp|Q84LB2|AFS1_MALDO 21 222 + 202 Gaps:65 46.35 576 42.32 6e-58 (E E)-alpha-farnesene synthase OS Malus domestica GN AFS1 PE 1 SV 2
blastp_uniprot_sprot sp|B9T536|TPS10_RICCO 23 220 + 198 Gaps:65 47.37 551 35.63 5e-39 Terpene synthase 10 OS Ricinus communis GN TPS10 PE 2 SV 1
blastp_uniprot_sprot sp|Q6PWU2|ATESY_VITVI 24 221 + 198 Gaps:62 44.07 590 34.62 5e-37 (-)-alpha-terpineol synthase OS Vitis vinifera PE 1 SV 1
blastp_uniprot_sprot sp|Q8L5K4|GTPS_CITLI 24 220 + 197 Gaps:65 43.33 600 33.46 7e-34 Gamma-terpinene synthase chloroplastic OS Citrus limon PE 1 SV 1
blastp_uniprot_sprot sp|Q93X23|MYRS_QUEIL 24 223 + 200 Gaps:62 43.89 597 34.35 1e-33 Myrcene synthase chloroplastic OS Quercus ilex PE 1 SV 1
blastp_uniprot_sprot sp|Q672F7|TPS2_LOTJA 23 223 + 201 Gaps:64 44.20 595 33.46 8e-33 Tricyclene synthase EBOS chloroplastic OS Lotus japonicus GN EBOS PE 1 SV 1
blastp_uniprot_sprot sp|B3TPQ7|ATESY_MAGGA 24 223 + 200 Gaps:64 44.26 592 34.35 1e-32 Alpha-terpineol synthase chloroplastic OS Magnolia grandiflora PE 1 SV 1
blastp_uniprot_sprot sp|Q9LRZ6|MYRS2_ARATH 23 223 + 201 Gaps:68 44.98 598 29.37 6e-30 Beta-myrcene/(E)-beta-ocimene synthase 2 chloroplastic OS Arabidopsis thaliana GN TPS24 PE 1 SV 1
blastp_uniprot_sprot sp|B9RPM3|TPS9_RICCO 21 222 + 202 Gaps:61 45.03 584 28.90 2e-29 Probable terpene synthase 9 OS Ricinus communis GN TPS9 PE 3 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 24 62 39 PF03936 none Terpene synthase family, metal binding domain IPR005630
Pfam 60 145 86 PF03936 none Terpene synthase family, metal binding domain IPR005630
SUPERFAMILY 21 221 201 SSF48576 none none IPR008949
Gene3D 60 221 162 G3DSA:1.10.600.10 none none IPR008949
Gene3D 22 59 38 G3DSA:1.10.600.10 none none IPR008949
PANTHER 21 223 203 PTHR31225 none none none
PANTHER 21 223 203 PTHR31225:SF0 none none none

1 Localization

Analysis Start End Length
SignalP_EUK 1 42 41

0 Qtllist

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 28   Secretory pathway 3 0.820 0.230 NON-PLANT 28