Protein : Qrob_P0119150.2 Q. robur
Protein Identifier  ? Qrob_P0119150.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR23430:SF24 - HISTONE H2A TYPE 2-C (PTHR23430:SF24) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 134  
Kegg Orthology  K11251
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0000786 nucleosome A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.
GO:0046982 protein heterodimerization activity Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103324589 1 133 + 133 Gaps:1 100.00 132 92.42 5e-80 histone H2A.6-like
blastp_kegg lcl|pper:PRUPE_ppa013252mg 1 133 + 133 Gaps:1 100.00 132 92.42 5e-80 hypothetical protein
blastp_kegg lcl|pop:POPTR_0011s13490g 1 133 + 133 none 99.25 134 88.72 1e-78 POPTRDRAFT_232345 histone H2A family protein
blastp_kegg lcl|cam:101490207 1 133 + 133 none 99.25 134 88.72 2e-78 probable histone H2A.3-like
blastp_kegg lcl|cam:101489870 1 133 + 133 none 98.52 135 88.72 2e-78 probable histone H2A.1-like
blastp_kegg lcl|pxb:103955921 1 133 + 133 Gaps:1 100.00 132 90.91 2e-78 histone H2A.6-like
blastp_kegg lcl|pda:103703548 1 133 + 133 none 98.52 135 87.22 4e-78 probable histone H2A.2
blastp_kegg lcl|mdm:103427812 1 133 + 133 Gaps:1 83.54 158 90.91 6e-78 histone H2A.6-like
blastp_kegg lcl|fve:101297024 1 133 + 133 Gaps:3 99.24 131 91.54 7e-78 probable histone H2A.3-like
blastp_kegg lcl|pxb:103946571 1 133 + 133 none 98.52 135 88.72 4e-77 histone H2A.6-like
blastp_pdb 2aro_E 1 122 + 122 Gaps:3 93.80 129 77.69 1e-60 mol:protein length:129 Histone H2A-IV
blastp_pdb 2aro_A 1 122 + 122 Gaps:3 93.80 129 77.69 1e-60 mol:protein length:129 Histone H2A-IV
blastp_pdb 1tzy_E 1 122 + 122 Gaps:3 93.80 129 77.69 1e-60 mol:protein length:129 Histone H2A-IV
blastp_pdb 1tzy_A 1 122 + 122 Gaps:3 93.80 129 77.69 1e-60 mol:protein length:129 Histone H2A-IV
blastp_pdb 1hq3_E 1 122 + 122 Gaps:3 93.80 129 77.69 1e-60 mol:protein length:129 HISTONE H2A-IV
blastp_pdb 1hq3_A 1 122 + 122 Gaps:3 93.80 129 77.69 1e-60 mol:protein length:129 HISTONE H2A-IV
blastp_pdb 1eqz_E 1 122 + 122 Gaps:3 93.80 129 77.69 1e-60 mol:protein length:129 PROTEIN (HISTONE H2A)
blastp_pdb 1eqz_A 1 122 + 122 Gaps:3 93.80 129 77.69 1e-60 mol:protein length:129 PROTEIN (HISTONE H2A)
blastp_pdb 3c1c_G 2 122 + 121 Gaps:1 93.02 129 76.67 3e-60 mol:protein length:129 Histone H2A type 1
blastp_pdb 3c1c_C 2 122 + 121 Gaps:1 93.02 129 76.67 3e-60 mol:protein length:129 Histone H2A type 1
blastp_uniprot_sprot sp|Q9C681|H2A1_ARATH 1 133 + 133 Gaps:1 100.00 132 88.64 3e-77 Probable histone H2A.1 OS Arabidopsis thaliana GN At1g51060 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LD28|H2A6_ARATH 1 133 + 133 Gaps:3 100.00 130 89.23 5e-76 Histone H2A.6 OS Arabidopsis thaliana GN RAT5 PE 1 SV 1
blastp_uniprot_sprot sp|O81826|H2A3_ARATH 1 124 + 124 none 94.66 131 91.13 5e-76 Probable histone H2A.3 OS Arabidopsis thaliana GN At4g27230 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LHQ5|H2A2_ARATH 1 132 + 132 none 100.00 132 86.36 2e-75 Probable histone H2A.2 OS Arabidopsis thaliana GN At3g20670 PE 1 SV 1
blastp_uniprot_sprot sp|Q43312|H2A7_WHEAT 1 133 + 133 Gaps:1 98.51 134 85.61 1e-74 Protein H2A.7 OS Triticum aestivum GN H2A-4 PE 2 SV 3
blastp_uniprot_sprot sp|Q84NJ4|H2A3_ORYSJ 1 133 + 133 none 99.25 134 84.21 4e-72 Probable histone H2A.3 OS Oryza sativa subsp. japonica GN Os08g0427700 PE 3 SV 1
blastp_uniprot_sprot sp|A2YVE5|H2A3_ORYSI 1 133 + 133 none 99.25 134 84.21 4e-72 Probable histone H2A.3 OS Oryza sativa subsp. indica GN OsI_028288 PE 3 SV 1
blastp_uniprot_sprot sp|Q6ZL42|H2A2_ORYSJ 1 133 + 133 none 98.52 135 83.46 3e-71 Probable histone H2A.2 OS Oryza sativa subsp. japonica GN Os07g0545400 PE 2 SV 1
blastp_uniprot_sprot sp|A2YMC6|H2A2_ORYSI 1 133 + 133 none 98.52 135 83.46 3e-71 Probable histone H2A.2 OS Oryza sativa subsp. indica GN OsI_025469 PE 3 SV 1
blastp_uniprot_sprot sp|O04848|H2AXA_ARATH 3 123 + 121 Gaps:4 82.39 142 90.60 2e-67 Probable histone H2AXa OS Arabidopsis thaliana GN At1g08880 PE 1 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 2 122 121 PTHR23430 none none none
SMART 4 124 121 SM00414 none Histone 2A IPR002119
Gene3D 9 123 115 G3DSA:1.10.20.10 none none IPR009072
PRINTS 15 37 23 PR00620 none Histone H2A signature IPR002119
PRINTS 44 59 16 PR00620 none Histone H2A signature IPR002119
PRINTS 73 87 15 PR00620 none Histone H2A signature IPR002119
PRINTS 101 119 19 PR00620 none Histone H2A signature IPR002119
PRINTS 59 72 14 PR00620 none Histone H2A signature IPR002119
ProSitePatterns 23 29 7 PS00046 none Histone H2A signature. IPR002119
SUPERFAMILY 17 121 105 SSF47113 none none IPR009072
Pfam 19 92 74 PF00125 none Core histone H2A/H2B/H3/H4 IPR007125
PANTHER 2 122 121 PTHR23430:SF24 none none none

0 Localization

0 Qtllist

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 43   Mitochondrion 3 0.025 0.818 NON-PLANT 43