Protein : Qrob_P0096890.2 Q. robur
Protein Identifier  ? Qrob_P0096890.2 Organism . Name  Quercus robur
Score  24.0 Score Type  egn
Protein Description  (M=6) K09285 - AP2-like factor, ANT lineage Gene Prediction Quality  validated
Protein length 

Sequence

Length: 485  
Kegg Orthology  K09285
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0007275 multicellular organismal development The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_000974 1 484 + 484 Gaps:60 100.00 520 73.08 0.0 AP2-like ethylene-responsive transcription factor AIL6
blastp_kegg lcl|vvi:100854470 1 484 + 484 Gaps:50 100.00 516 72.29 0.0 AP2-like ethylene-responsive transcription factor AIL6-like
blastp_kegg lcl|pmum:103335042 1 481 + 481 Gaps:48 99.24 523 70.71 0.0 AP2-like ethylene-responsive transcription factor AIL6
blastp_kegg lcl|cic:CICLE_v10025339mg 1 484 + 484 Gaps:70 100.00 532 68.23 0.0 hypothetical protein
blastp_kegg lcl|cit:102615846 1 484 + 484 Gaps:74 100.00 536 67.72 0.0 AP2-like ethylene-responsive transcription factor AIL6-like
blastp_kegg lcl|mdm:103401532 1 484 + 484 Gaps:52 100.00 528 67.42 0.0 AP2-like ethylene-responsive transcription factor AIL6
blastp_kegg lcl|pxb:103954713 1 482 + 482 Gaps:56 99.62 532 65.66 0.0 AP2-like ethylene-responsive transcription factor AIL6
blastp_kegg lcl|pxb:103954164 1 482 + 482 Gaps:60 99.63 534 66.92 0.0 AP2-like ethylene-responsive transcription factor AIL6
blastp_kegg lcl|pper:PRUPE_ppa019186mg 1 481 + 481 Gaps:74 99.26 543 65.49 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_002G146400g 1 484 + 484 Gaps:53 100.00 503 67.40 0.0 hypothetical protein
blastp_uniprot_sprot sp|Q52QU2|AIL6_ARATH 1 484 + 484 Gaps:112 99.83 581 58.10 0.0 AP2-like ethylene-responsive transcription factor AIL6 OS Arabidopsis thaliana GN AIL6 PE 2 SV 1
blastp_uniprot_sprot sp|Q6J9N8|AIL7_ARATH 3 484 + 482 Gaps:93 99.40 498 58.99 4e-152 AP2-like ethylene-responsive transcription factor AIL7 OS Arabidopsis thaliana GN AIL7 PE 2 SV 2
blastp_uniprot_sprot sp|Q5YGP8|PLET1_ARATH 4 393 + 390 Gaps:75 65.33 574 53.60 1e-105 AP2-like ethylene-responsive transcription factor PLT1 OS Arabidopsis thaliana GN PLT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5YGP7|PLET2_ARATH 4 393 + 390 Gaps:102 67.61 568 53.65 2e-104 AP2-like ethylene-responsive transcription factor PLT2 OS Arabidopsis thaliana GN PLT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q6PQQ3|AIL5_ARATH 83 448 + 366 Gaps:80 63.08 558 55.11 1e-102 AP2-like ethylene-responsive transcription factor AIL5 OS Arabidopsis thaliana GN AIL5 PE 2 SV 2
blastp_uniprot_sprot sp|Q6PQQ4|BBM_ARATH 196 385 + 190 Gaps:21 36.13 584 72.04 8e-98 AP2-like ethylene-responsive transcription factor BBM OS Arabidopsis thaliana GN BBM PE 2 SV 2
blastp_uniprot_sprot sp|Q8LSN2|BBM2_BRANA 209 385 + 177 Gaps:21 34.20 579 75.25 1e-96 AP2-like ethylene-responsive transcription factor BBM2 OS Brassica napus GN BBM2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L3U3|BBM1_BRANA 209 385 + 177 Gaps:21 34.20 579 75.25 3e-96 AP2-like ethylene-responsive transcription factor BBM1 OS Brassica napus GN BBM1 PE 2 SV 1
blastp_uniprot_sprot sp|Q1PFE1|AIL1_ARATH 209 377 + 169 Gaps:20 45.54 415 68.78 2e-86 AP2-like ethylene-responsive transcription factor AIL1 OS Arabidopsis thaliana GN AIL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q38914|ANT_ARATH 197 423 + 227 Gaps:45 44.68 555 58.06 2e-84 AP2-like ethylene-responsive transcription factor ANT OS Arabidopsis thaliana GN ANT PE 1 SV 2
rpsblast_cdd gnl|CDD|197689 221 367 + 147 Gaps:10 100.00 64 64.06 1e-18 smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs.
rpsblast_cdd gnl|CDD|28902 220 361 + 142 Gaps:6 100.00 61 67.21 1e-14 cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE) a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1 which is involved in stress response contain a single copy of the AP2 domain. APETALA2-like proteins which play a role in plant development contain two copies..

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 220 286 67 SSF54171 none none IPR016177
Pfam 308 353 46 PF00847 none AP2 domain IPR001471
Pfam 220 276 57 PF00847 none AP2 domain IPR001471
SMART 309 367 59 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
SMART 221 290 70 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
PRINTS 343 363 21 PR00367 none Ethylene responsive element binding protein signature IPR001471
PRINTS 222 233 12 PR00367 none Ethylene responsive element binding protein signature IPR001471
PANTHER 17 449 433 PTHR32467 none none IPR031112
SUPERFAMILY 309 362 54 SSF54171 none none IPR016177
Gene3D 309 361 53 G3DSA:3.30.730.10 none none IPR001471
Gene3D 221 285 65 G3DSA:3.30.730.10 none none IPR001471
ProSiteProfiles 221 284 64 PS51032 none AP2/ERF domain profile. IPR001471
ProSiteProfiles 294 361 68 PS51032 none AP2/ERF domain profile. IPR001471
PANTHER 17 449 433 PTHR32467:SF5 none none none

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9

0 Targeting