Protein : Qrob_P0095120.2 Q. robur
Protein Identifier  ? Qrob_P0095120.2 Organism . Name  Quercus robur
Score  97.0 Score Type  egn
Protein Description  (M=9) K15014 - solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 423  
Kegg Orthology  K15014
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO:0005337 nucleoside transmembrane transporter activity Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_007894 27 421 + 395 Gaps:10 85.99 471 82.47 0.0 Major facilitator superfamily protein isoform 1
blastp_kegg lcl|pper:PRUPE_ppa018615mg 1 422 + 422 Gaps:25 100.00 417 80.34 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_005G109300g 24 422 + 399 Gaps:10 98.79 414 81.42 0.0 hypothetical protein
blastp_kegg lcl|vvi:100261396 27 422 + 396 Gaps:8 96.88 417 80.94 0.0 equilibrative nucleoside transporter 4-like
blastp_kegg lcl|pmum:103329499 28 422 + 395 Gaps:10 97.12 417 80.99 0.0 equilibrative nucleotide transporter 3-like
blastp_kegg lcl|pop:POPTR_0019s14090g 26 422 + 397 Gaps:11 97.61 418 84.07 0.0 POPTRDRAFT_250534 hypothetical protein
blastp_kegg lcl|cmo:103498218 27 422 + 396 Gaps:10 95.53 425 79.80 0.0 equilibrative nucleotide transporter 3-like
blastp_kegg lcl|fve:101296839 27 422 + 396 Gaps:10 97.83 415 79.56 0.0 equilibrative nucleotide transporter 3-like
blastp_kegg lcl|mdm:103404758 27 422 + 396 Gaps:11 97.37 418 81.33 0.0 equilibrative nucleotide transporter 3-like
blastp_kegg lcl|pxb:103941978 27 422 + 396 Gaps:11 97.37 418 81.33 0.0 equilibrative nucleotide transporter 3-like
blastp_uniprot_sprot sp|Q9M0Y3|ENT3_ARATH 1 420 + 420 Gaps:24 99.04 418 71.26 0.0 Equilibrative nucleotide transporter 3 OS Arabidopsis thaliana GN ENT3 PE 1 SV 1
blastp_uniprot_sprot sp|Q944N8|ENT6_ARATH 28 420 + 393 Gaps:9 96.17 418 67.91 0.0 Equilibrative nucleotide transporter 6 OS Arabidopsis thaliana GN ENT6 PE 1 SV 1
blastp_uniprot_sprot sp|Q9M0Y1|ENT5_ARATH 27 420 + 394 Gaps:10 96.42 419 66.83 0.0 Equilibrative nucleotide transporter 5 OS Arabidopsis thaliana GN ENT5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M0Y2|ENT4_ARATH 27 422 + 396 Gaps:9 96.89 418 64.20 0.0 Equilibrative nucleotide transporter 4 OS Arabidopsis thaliana GN ENT4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SR64|ENT2_ARATH 17 422 + 406 Gaps:11 100.00 417 62.83 0.0 Equilibrative nucleotide transporter 2 OS Arabidopsis thaliana GN ENT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q944P0|ENT7_ARATH 24 420 + 397 Gaps:11 97.84 417 59.07 1e-168 Equilibrative nucleotide transporter 7 OS Arabidopsis thaliana GN ENT7 PE 1 SV 1
blastp_uniprot_sprot sp|Q8VXY7|ENT1_ARATH 32 418 + 387 Gaps:24 86.44 450 34.19 1e-50 Equilibrative nucleotide transporter 1 OS Arabidopsis thaliana GN ENT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q84XI3|ENT8_ARATH 33 418 + 386 Gaps:31 95.37 389 32.35 1e-46 Equilibrative nucleotide transporter 8 OS Arabidopsis thaliana GN ETN8 PE 2 SV 1
blastp_uniprot_sprot sp|A1L272|S29A4_DANRE 148 409 + 262 Gaps:64 59.46 518 24.35 4e-11 Equilibrative nucleoside transporter 4 OS Danio rerio GN slc29a4 PE 2 SV 1
blastp_uniprot_sprot sp|Q14542|S29A2_HUMAN 128 416 + 289 Gaps:50 72.15 456 21.58 4e-08 Equilibrative nucleoside transporter 2 OS Homo sapiens GN SLC29A2 PE 1 SV 3
rpsblast_cdd gnl|CDD|162122 40 416 + 377 Gaps:60 98.17 437 21.68 5e-29 TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
rpsblast_cdd gnl|CDD|110711 143 416 + 274 Gaps:36 96.39 305 23.47 2e-21 pfam01733 Nucleoside_tran Nucleoside transporter. This is a family of nucleoside transporters. In mammalian cells nucleoside transporters transport nucleoside across the plasma membrane and are essential for nucleotide synthesis via the salvage pathways for cells that lack their own de novo synthesis pathways. Also in this family is mouse and human nucleolar protein HNP36 a protein of unknown function although it has been hypothesised to be a plasma membrane nucleoside transporter.
rpsblast_kog gnl|CDD|36692 28 420 + 393 Gaps:25 97.04 406 40.10 5e-91 KOG1479 KOG1479 KOG1479 Nucleoside transporter [Nucleotide transport and metabolism].

28 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 52 70 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 166 188 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 31 422 392 PTHR10332:SF30 none none IPR030200
Phobius 301 321 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 353 357 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 270 289 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 322 332 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 290 300 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 146 165 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 32 51 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 394 417 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 333 352 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 31 31 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 200 221 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 222 269 48 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 358 382 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 189 199 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 383 393 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 31 422 392 PTHR10332 "Reactome:REACT_15518","Reactome:REACT_1698";signature_desc=EQUILIBRATIVE NUCLEOSIDE TRANSPORTER none IPR002259
Phobius 71 89 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PIRSF 1 420 420 PIRSF016379 "Reactome:REACT_15518","Reactome:REACT_1698" none IPR002259
Phobius 101 120 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 38 415 378 SSF103473 none none IPR020846
Phobius 126 145 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 90 100 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 121 125 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 418 422 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 142 416 275 PF01733 "Reactome:REACT_15518","Reactome:REACT_1698" Nucleoside transporter IPR002259

11 Localization

Analysis Start End Length
TMHMM 33 55 22
TMHMM 100 122 22
TMHMM 127 149 22
TMHMM 361 383 22
TMHMM 162 184 22
TMHMM 300 322 22
TMHMM 396 418 22
TMHMM 334 351 17
TMHMM 70 87 17
TMHMM 199 221 22
TMHMM 263 285 22

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting