Protein : Qrob_P0086800.2 Q. robur
Protein Identifier  ? Qrob_P0086800.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) PTHR22814:SF47 - HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING PROTEIN Gene Prediction Quality  validated
Protein length 

Sequence

Length: 147  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0030001 metal ion transport The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

17 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10013659mg 1 146 + 146 none 100.00 146 91.10 2e-96 hypothetical protein
blastp_kegg lcl|cit:102611787 1 146 + 146 none 100.00 146 91.10 2e-96 heavy metal-associated isoprenylated plant protein 26-like
blastp_kegg lcl|pmum:103328703 1 146 + 146 Gaps:1 100.00 147 87.76 4e-91 heavy metal-associated isoprenylated plant protein 26
blastp_kegg lcl|pper:PRUPE_ppa021641mg 1 146 + 146 Gaps:1 100.00 147 87.76 4e-91 hypothetical protein
blastp_kegg lcl|pop:POPTR_0005s14720g 1 146 + 146 none 100.00 146 87.67 1e-90 heavy-metal-associated domain-containing family protein
blastp_kegg lcl|tcc:TCM_019282 1 146 + 146 Gaps:3 96.13 155 85.91 3e-89 Heavy metal transport/detoxification superfamily protein
blastp_kegg lcl|mdm:103444167 1 146 + 146 Gaps:2 100.00 148 86.49 7e-87 heavy metal-associated isoprenylated plant protein 26
blastp_kegg lcl|pxb:103961029 1 146 + 146 Gaps:2 100.00 148 86.49 2e-86 heavy metal-associated isoprenylated plant protein 26-like
blastp_kegg lcl|pvu:PHAVU_004G001200g 1 146 + 146 Gaps:4 100.00 150 81.33 5e-83 hypothetical protein
blastp_kegg lcl|vvi:100254317 1 146 + 146 Gaps:1 100.00 147 78.91 3e-80 uncharacterized LOC100254317
blastp_uniprot_sprot sp|Q9SZN7|HIP26_ARATH 1 146 + 146 Gaps:7 100.00 153 51.63 4e-46 Heavy metal-associated isoprenylated plant protein 26 OS Arabidopsis thaliana GN HIPP26 PE 1 SV 1
blastp_uniprot_sprot sp|Q94BT9|ATOX1_ARATH 7 89 + 83 Gaps:1 77.36 106 43.90 3e-14 Copper transport protein ATX1 OS Arabidopsis thaliana GN ATX1 PE 1 SV 1
blastp_uniprot_sprot sp|O82089|CCH_ARATH 24 89 + 66 none 54.55 121 45.45 2e-12 Copper transport protein CCH OS Arabidopsis thaliana GN CCH PE 1 SV 1
rpsblast_cdd gnl|CDD|29471 32 86 + 55 Gaps:2 90.48 63 31.58 1e-09 cd00371 HMA Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals for example the CPx-type heavy metal ATPases and copper chaperones. HMA domain contains two cysteine residues that are important in binding and transfer of metal ions such as copper cadmium cobalt and zinc. In the case of copper stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions..
rpsblast_cdd gnl|CDD|201210 28 84 + 57 Gaps:3 96.77 62 31.67 7e-09 pfam00403 HMA Heavy-metal-associated domain.
rpsblast_kog gnl|CDD|36816 24 89 + 66 Gaps:1 91.78 73 52.24 1e-13 KOG1603 KOG1603 KOG1603 Copper chaperone [Inorganic ion transport and metabolism].
rpsblast_kog gnl|CDD|39855 25 85 + 61 none 24.70 247 32.79 3e-07 KOG4656 KOG4656 KOG4656 Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 32 87 56 PS50846 none Heavy-metal-associated domain profile. IPR006121
Gene3D 23 89 67 G3DSA:3.30.70.100 none none none
SUPERFAMILY 24 89 66 SSF55008 none none IPR006121
PANTHER 8 131 124 PTHR22814:SF47 none none none
PANTHER 8 131 124 PTHR22814 none none none
Pfam 29 83 55 PF00403 none Heavy-metal-associated domain IPR006121

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03

0 Targeting