Protein : Qrob_P0084220.2 Q. robur
Protein Identifier  ? Qrob_P0084220.2 Organism . Name  Quercus robur
Protein Description  (M=1) KOG0483//KOG0485//KOG0488//KOG0489//KOG0492//KOG0493//KOG0494//KOG0843//KOG0848//KOG0850 - Transcription factor HEX contains HOX and HALZ domains [Transcription]. // Transcription factor NKX-5.1/HMX1 contains HOX domain [Transcription]. // Transcription factor BarH and related HOX domain proteins [General function prediction only]. // Transcription factor zerknullt and related HOX domain proteins [General function prediction only]. // Transcription factor MSH contains HOX domain [General function prediction only]. // Transcription factor Engrailed contains HOX domain [General function prediction only]. // Transcription factor CHX10 and related HOX domain proteins [General function prediction only]. // Transcription factor EMX1 and related HOX domain proteins [Transcription]. // Transcription factor Caudal contains HOX domain [Transcription]. // Transcription factor DLX and related proteins with LIM Zn-binding and HOX domains [Transcription]. Alias (in v1)  Qrob_P0137260.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 236  
Kegg Orthology  K09338
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.

44 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1368840 8 234 + 227 Gaps:7 93.33 240 50.89 2e-62 homeobox protein putative
blastp_kegg lcl|gmx:100793260 1 234 + 234 Gaps:19 96.02 251 52.70 2e-61 homeobox-leucine zipper protein ATHB-7-like
blastp_kegg lcl|pvu:PHAVU_009G049600g 1 234 + 234 Gaps:15 97.13 244 51.48 1e-59 hypothetical protein
blastp_kegg lcl|mtr:MTR_3g092150 18 234 + 217 Gaps:12 90.57 244 51.13 3e-56 Homeobox-leucine zipper protein ATHB-7
blastp_kegg lcl|mdm:103439396 9 229 + 221 Gaps:15 91.74 242 46.40 3e-53 homeobox-leucine zipper protein ATHB-12-like
blastp_kegg lcl|gmx:100811208 1 235 + 235 Gaps:23 97.14 245 46.22 2e-52 homeobox-leucine zipper protein ATHB-12-like
blastp_kegg lcl|pper:PRUPE_ppa011221mg 19 228 + 210 Gaps:23 87.21 219 52.88 1e-51 hypothetical protein
blastp_kegg lcl|pmum:103333586 19 229 + 211 Gaps:23 87.67 219 51.04 1e-50 homeobox-leucine zipper protein ATHB-12-like
blastp_kegg lcl|gmx:100797862 5 235 + 231 Gaps:21 96.64 238 46.96 6e-50 homeobox-leucine zipper protein ATHB-12-like
blastp_kegg lcl|pxb:103951604 26 235 + 210 Gaps:7 89.61 231 48.31 1e-49 homeobox-leucine zipper protein ATHB-12-like
blastp_pdb 2e1o_A 41 91 + 51 none 72.86 70 47.06 5e-08 mol:protein length:70 Homeobox protein PRH
blastp_pdb 2jwt_A 42 91 + 50 none 81.97 61 48.00 2e-06 mol:protein length:61 Segmentation polarity homeobox protein engrai
blastp_pdb 1hdd_D 42 91 + 50 none 81.97 61 48.00 2e-06 mol:protein length:61 PROTEIN (ENGRAILED HOMEODOMAIN)
blastp_pdb 1hdd_C 42 91 + 50 none 81.97 61 48.00 2e-06 mol:protein length:61 PROTEIN (ENGRAILED HOMEODOMAIN)
blastp_pdb 3hdd_B 42 91 + 50 none 83.33 60 48.00 2e-06 mol:protein length:60 ENGRAILED HOMEODOMAIN
blastp_pdb 3hdd_A 42 91 + 50 none 83.33 60 48.00 2e-06 mol:protein length:60 ENGRAILED HOMEODOMAIN
blastp_pdb 1san_A 42 91 + 50 none 80.65 62 42.00 2e-06 mol:protein length:62 ANTENNAPEDIA PROTEIN
blastp_pdb 2r5z_A 39 91 + 53 none 60.23 88 39.62 3e-06 mol:protein length:88 Homeotic protein Sex combs reduced
blastp_pdb 2r5y_A 39 91 + 53 none 60.23 88 39.62 3e-06 mol:protein length:88 Homeotic protein Sex combs reduced
blastp_pdb 1enh_A 39 89 + 51 none 94.44 54 45.10 3e-06 mol:protein length:54 ENGRAILED HOMEODOMAIN
blastp_uniprot_sprot sp|P46897|ATHB7_ARATH 8 229 + 222 Gaps:32 93.02 258 47.50 1e-51 Homeobox-leucine zipper protein ATHB-7 OS Arabidopsis thaliana GN ATHB-7 PE 2 SV 2
blastp_uniprot_sprot sp|Q9M276|ATB12_ARATH 41 206 + 166 Gaps:14 70.64 235 54.82 3e-42 Homeobox-leucine zipper protein ATHB-12 OS Arabidopsis thaliana GN ATHB-12 PE 2 SV 1
blastp_uniprot_sprot sp|Q651Z5|HOX6_ORYSJ 39 151 + 113 none 45.38 249 61.95 7e-40 Homeobox-leucine zipper protein HOX6 OS Oryza sativa subsp. japonica GN HOX6 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XH35|HOX6_ORYSI 39 151 + 113 none 45.38 249 61.95 7e-40 Homeobox-leucine zipper protein HOX6 OS Oryza sativa subsp. indica GN HOX6 PE 2 SV 2
blastp_uniprot_sprot sp|Q6Z248|HOX20_ORYSJ 39 185 + 147 Gaps:16 54.65 269 40.82 8e-32 Homeobox-leucine zipper protein HOX20 OS Oryza sativa subsp. japonica GN HOX20 PE 2 SV 1
blastp_uniprot_sprot sp|A2YWC0|HOX20_ORYSI 39 185 + 147 Gaps:16 54.65 269 40.82 8e-32 Homeobox-leucine zipper protein HOX20 OS Oryza sativa subsp. indica GN HOX20 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XUJ5|HOX22_ORYSJ 39 128 + 90 Gaps:1 32.97 276 61.54 2e-30 Homeobox-leucine zipper protein HOX22 OS Oryza sativa subsp. japonica GN HOX22 PE 2 SV 2
blastp_uniprot_sprot sp|Q01IK0|HOX22_ORYSI 39 128 + 90 Gaps:1 32.97 276 61.54 2e-30 Homeobox-leucine zipper protein HOX22 OS Oryza sativa subsp. indica GN HOX22 PE 2 SV 2
blastp_uniprot_sprot sp|Q6K498|HOX4_ORYSJ 39 135 + 97 none 35.02 277 52.58 8e-30 Homeobox-leucine zipper protein HOX4 OS Oryza sativa subsp. japonica GN HOX4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9XH37|HOX4_ORYSI 39 135 + 97 none 35.02 277 52.58 8e-30 Homeobox-leucine zipper protein HOX4 OS Oryza sativa subsp. indica GN HOX4 PE 1 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 73 89 17 PR00031 none Lambda-repressor HTH signature IPR000047
PRINTS 64 73 10 PR00031 none Lambda-repressor HTH signature IPR000047
Pfam 40 91 52 PF00046 none Homeobox domain IPR001356
Coils 85 127 43 Coil none none none
ProSiteProfiles 33 93 61 PS50071 none 'Homeobox' domain profile. IPR001356
PANTHER 38 134 97 PTHR24326:SF122 none none none
SMART 31 97 67 SM00389 none Homeodomain IPR001356
PANTHER 38 134 97 PTHR24326 none none none
SUPERFAMILY 28 94 67 SSF46689 none none IPR009057
Gene3D 40 100 61 G3DSA:1.10.10.60 none none IPR009057
Pfam 93 134 42 PF02183 none Homeobox associated leucine zipper IPR003106
ProSitePatterns 68 91 24 PS00027 none 'Homeobox' domain signature. IPR017970

0 Localization

0 Qtllist

0 Targeting