Protein : Qrob_P0082940.2 Q. robur
Protein Identifier  ? Qrob_P0082940.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=6) PTHR10015//PTHR10015:SF137 - HEAT SHOCK TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 101  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0009408 response to heat Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0017s08630g 7 88 + 82 Gaps:4 17.73 485 79.07 1e-38 Heat Stress Transcription Factor family protein
blastp_kegg lcl|gmx:100816484 1 78 + 78 Gaps:4 15.45 479 83.78 2e-36 heat stress transcription factor A-5-like
blastp_kegg lcl|gmx:100786408 1 78 + 78 Gaps:6 15.09 477 86.11 6e-36 heat stress transcription factor A-5-like
blastp_kegg lcl|cam:101494390 1 78 + 78 Gaps:2 15.77 482 81.58 3e-35 heat stress transcription factor A-5-like
blastp_kegg lcl|pop:POPTR_0001s32810g 1 88 + 88 Gaps:7 19.39 490 74.74 6e-35 POPTRDRAFT_641884 Heat Stress Transcription Factor family protein
blastp_kegg lcl|fve:101302160 1 78 + 78 Gaps:3 15.72 477 92.00 2e-34 heat stress transcription factor A-5-like
blastp_kegg lcl|cic:CICLE_v10006893mg 20 78 + 59 none 75.64 78 93.22 2e-33 hypothetical protein
blastp_kegg lcl|pxb:103962560 17 78 + 62 none 12.84 483 91.94 3e-33 heat stress transcription factor A-5
blastp_kegg lcl|mtr:MTR_1g107080 1 78 + 78 Gaps:3 24.62 329 70.37 3e-33 Heat stress transcription factor A-5
blastp_kegg lcl|mtr:MTR_2g100670 1 88 + 88 Gaps:5 22.20 419 66.67 5e-33 Heat stress transcription factor A-5
blastp_pdb 1hkt_A 13 78 + 66 Gaps:1 61.32 106 50.77 7e-17 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1hks_A 13 78 + 66 Gaps:1 61.32 106 50.77 7e-17 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 2ldu_A 11 78 + 68 Gaps:1 53.60 125 49.25 3e-15 mol:protein length:125 Heat shock factor protein 1
blastp_pdb 3hts_B 6 78 + 73 Gaps:1 70.59 102 43.06 7e-14 mol:protein length:102 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hsf_A 15 78 + 64 Gaps:1 68.48 92 46.03 8e-13 mol:protein length:92 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 2hts_A 15 78 + 64 Gaps:1 68.48 92 46.03 8e-13 mol:protein length:92 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1fym_B 15 78 + 64 Gaps:1 68.48 92 46.03 8e-13 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fym_A 15 78 + 64 Gaps:1 68.48 92 46.03 8e-13 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fyl_B 15 78 + 64 Gaps:1 68.48 92 46.03 8e-13 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_pdb 1fyl_A 15 78 + 64 Gaps:1 68.48 92 46.03 8e-13 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_uniprot_sprot sp|Q94BZ5|HSFA5_ARATH 20 78 + 59 none 12.66 466 84.75 1e-29 Heat stress transcription factor A-5 OS Arabidopsis thaliana GN HSFA5 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XHZ0|HFB4B_ORYSJ 17 94 + 78 Gaps:5 26.77 310 62.65 6e-29 Heat stress transcription factor B-4b OS Oryza sativa subsp. japonica GN HSFB4B PE 1 SV 1
blastp_uniprot_sprot sp|Q6F388|HFA2E_ORYSJ 2 78 + 77 none 21.57 357 64.94 1e-28 Heat stress transcription factor A-2e OS Oryza sativa subsp. japonica GN HSFA2E PE 2 SV 1
blastp_uniprot_sprot sp|Q9C635|HSFB4_ARATH 11 100 + 90 Gaps:4 27.01 348 54.26 2e-28 Heat stress transcription factor B-4 OS Arabidopsis thaliana GN HSFB4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LQM7|HFA1D_ARATH 1 78 + 78 Gaps:18 19.79 485 56.25 2e-28 Heat stress transcription factor A-1d OS Arabidopsis thaliana GN HSFA1D PE 2 SV 2
blastp_uniprot_sprot sp|Q84T61|HSFA1_ORYSJ 5 78 + 74 none 14.62 506 67.57 7e-28 Heat stress transcription factor A-1 OS Oryza sativa subsp. japonica GN HSFA1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SCW5|HFA1E_ARATH 19 78 + 60 none 12.82 468 76.67 3e-27 Heat stress transcription factor A-1e OS Arabidopsis thaliana GN HSFA1E PE 2 SV 2
blastp_uniprot_sprot sp|P41153|HSF8_SOLPE 20 78 + 59 none 11.20 527 77.97 4e-27 Heat shock factor protein HSF8 OS Solanum peruvianum GN HSF8 PE 2 SV 1
blastp_uniprot_sprot sp|Q40152|HSF8_SOLLC 20 78 + 59 none 11.20 527 77.97 8e-27 Heat shock factor protein HSF8 OS Solanum lycopersicum GN HSF8 PE 3 SV 1
blastp_uniprot_sprot sp|P41152|HSF30_SOLPE 2 78 + 77 Gaps:2 22.51 351 59.49 9e-27 Heat shock factor protein HSF30 OS Solanum peruvianum GN HSF30 PE 2 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 20 78 59 PF00447 none HSF-type DNA-binding IPR000232
Gene3D 15 78 64 G3DSA:1.10.10.10 none none IPR011991
SMART 16 96 81 SM00415 none heat shock factor IPR000232
PANTHER 11 78 68 PTHR10015 none none IPR027725
PANTHER 11 78 68 PTHR10015:SF137 none none IPR027709
SUPERFAMILY 16 79 64 SSF46785 none none none
PRINTS 58 70 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 71 83 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 20 43 24 PR00056 none Heat shock factor (HSF) domain signature IPR000232

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting