Protein : Qrob_P0080570.2 Q. robur
Protein Identifier  ? Qrob_P0080570.2 Organism . Name  Quercus robur
Score  20.3 Score Type  egn
Protein Description  (M=4) PTHR31561:SF2 - 3-KETOACYL-COA SYNTHASE 10 (PTHR31561:SF2) Code Enzyme  EC:2.3.1.199
Gene Prediction Quality  validated Protein length 

Sequence

Length: 508  
Kegg Orthology  K15397
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0006633 fatty acid biosynthetic process The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).
GO:0008610 lipid biosynthetic process The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103324337 1 507 + 507 Gaps:2 98.83 515 77.60 0.0 3-ketoacyl-CoA synthase 15
blastp_kegg lcl|vvi:100256735 5 507 + 503 Gaps:2 99.01 506 77.45 0.0 3-ketoacyl-CoA synthase 10-like
blastp_kegg lcl|rcu:RCOM_0771540 2 505 + 504 Gaps:6 99.01 503 77.91 0.0 acyltransferase putative
blastp_kegg lcl|gmx:100813868 1 507 + 507 none 99.61 509 76.33 0.0 3-ketoacyl-CoA synthase 10-like
blastp_kegg lcl|gmx:100784948 1 507 + 507 none 99.61 509 76.13 0.0 3-ketoacyl-CoA synthase 10-like
blastp_kegg lcl|cit:102616191 1 506 + 506 Gaps:1 99.02 510 74.26 0.0 3-ketoacyl-CoA synthase 10-like
blastp_kegg lcl|cic:CICLE_v10008053mg 1 506 + 506 Gaps:1 99.41 508 74.26 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_006G184900g 1 507 + 507 none 99.61 509 74.56 0.0 hypothetical protein
blastp_kegg lcl|cam:101496684 1 507 + 507 Gaps:4 99.60 505 72.17 0.0 3-ketoacyl-CoA synthase 10-like
blastp_kegg lcl|mtr:MTR_2g013740 1 507 + 507 Gaps:4 99.60 505 74.35 0.0 3-ketoacyl-CoA synthase
blastp_pdb 1u0m_B 129 483 + 355 Gaps:70 85.08 382 27.38 4e-12 mol:protein length:382 putative polyketide synthase
blastp_pdb 1u0m_A 129 483 + 355 Gaps:70 85.08 382 27.38 4e-12 mol:protein length:382 putative polyketide synthase
blastp_uniprot_sprot sp|Q570B4|KCS10_ARATH 4 506 + 503 Gaps:33 97.45 550 54.66 0.0 3-ketoacyl-CoA synthase 10 OS Arabidopsis thaliana GN FDH PE 1 SV 2
blastp_uniprot_sprot sp|Q9SUY9|KCS15_ARATH 3 504 + 502 Gaps:55 99.56 451 62.81 0.0 3-ketoacyl-CoA synthase 15 OS Arabidopsis thaliana GN KCS15 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LN49|KCS4_ARATH 37 504 + 468 Gaps:9 92.05 516 51.58 9e-177 3-ketoacyl-CoA synthase 4 OS Arabidopsis thaliana GN KCS4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIX1|KCS9_ARATH 34 504 + 471 Gaps:9 93.36 512 50.84 1e-173 3-ketoacyl-CoA synthase 9 OS Arabidopsis thaliana GN KCS9 PE 2 SV 1
blastp_uniprot_sprot sp|O48780|KCS11_ARATH 37 507 + 471 Gaps:10 94.11 509 51.36 3e-170 3-ketoacyl-CoA synthase 11 OS Arabidopsis thaliana GN KCS11 PE 2 SV 1
blastp_uniprot_sprot sp|Q9MAM3|KCS1_ARATH 1 502 + 502 Gaps:23 95.64 528 48.91 2e-167 3-ketoacyl-CoA synthase 1 OS Arabidopsis thaliana GN KCS1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XF43|KCS6_ARATH 37 504 + 468 Gaps:9 95.57 497 50.11 9e-166 3-ketoacyl-CoA synthase 6 OS Arabidopsis thaliana GN CUT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q5XEP9|KCS17_ARATH 36 507 + 472 Gaps:19 92.23 528 49.90 7e-164 3-ketoacyl-CoA synthase 17 OS Arabidopsis thaliana GN KCS17 PE 2 SV 2
blastp_uniprot_sprot sp|Q9C6L5|KCS5_ARATH 37 504 + 468 Gaps:9 96.54 492 48.42 1e-158 3-ketoacyl-CoA synthase 5 OS Arabidopsis thaliana GN KCS5 PE 1 SV 1
blastp_uniprot_sprot sp|O65677|KCS2_ARATH 48 504 + 457 Gaps:5 94.46 487 48.70 8e-156 Probable 3-ketoacyl-CoA synthase 2 OS Arabidopsis thaliana GN KCS2 PE 2 SV 1
rpsblast_cdd gnl|CDD|166495 3 504 + 502 Gaps:31 97.31 521 50.89 1e-156 PLN02854 PLN02854 3-ketoacyl-CoA synthase.
rpsblast_cdd gnl|CDD|165836 36 507 + 472 Gaps:10 93.93 511 51.88 1e-155 PLN02192 PLN02192 3-ketoacyl-CoA synthase.
rpsblast_cdd gnl|CDD|166018 36 504 + 469 Gaps:9 94.82 502 50.84 1e-151 PLN02377 PLN02377 3-ketoacyl-CoA synthase.
rpsblast_cdd gnl|CDD|178520 53 504 + 452 Gaps:15 97.28 478 47.96 1e-123 PLN02932 PLN02932 3-ketoacyl-CoA synthase.
rpsblast_cdd gnl|CDD|116972 113 396 + 284 none 97.93 290 53.52 1e-119 pfam08392 FAE1_CUT1_RppA FAE1/Type III polyketide synthase-like protein. The members of this family are described as 3-ketoacyl-CoA synthases type III polyketide synthases fatty acid elongases and fatty acid condensing enzymes and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues as well as motifs involved in substrate binding.
rpsblast_cdd gnl|CDD|177808 98 496 + 399 Gaps:5 86.70 466 47.03 1e-112 PLN00415 PLN00415 3-ketoacyl-CoA synthase.
rpsblast_cdd gnl|CDD|29418 117 490 + 374 Gaps:38 94.74 361 41.81 2e-88 cd00831 CHS_like Chalcone and stilbene synthases plant-specific polyketide synthases (PKS) and related enzymes also called type III PKSs. PKS generate an array of different products dependent on the nature of the starter molecule. They share a common chemical strategy after the starter molecule is loaded onto the active site cysteine a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs using coenzyme A esters to deliver substrate to the active site but they differ in the choice of starter molecule and the number of condensation reactions..
rpsblast_cdd gnl|CDD|33230 157 494 + 338 Gaps:38 88.76 356 25.00 1e-23 COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis transport and catabolism].

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 89 109 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 288 298 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 110 241 132 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 326 494 169 G3DSA:3.40.47.10 none none IPR016038
PIRSF 39 507 469 PIRSF036417 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094" none IPR012392
Phobius 316 507 192 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 112 312 201 G3DSA:3.40.47.10 none none IPR016038
Phobius 260 265 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 242 259 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 299 315 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 53 77 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 78 88 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 17 506 490 PTHR31561:SF2 none none none
Phobius 266 287 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 104 319 216 SSF53901 none none IPR016039
Pfam 414 491 78 PF08541 "KEGG:00061+2.3.1.180","MetaCyc:PWY-4381","UniPathway:UPA00094" 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IPR013747
Pfam 112 396 285 PF08392 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094" FAE1/Type III polyketide synthase-like protein IPR013601
PANTHER 17 506 490 PTHR31561 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094";signature_desc=FAMILY NOT NAMED none IPR012392
Coils 423 444 22 Coil none none none
SUPERFAMILY 301 493 193 SSF53901 none none IPR016039
Phobius 1 52 52 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

2 Localization

Analysis Start End Length
TMHMM 51 73 22
TMHMM 94 111 17

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran_2000_2002_QTL1_Delta.F Qrob_Chr11 11 v_AC14YL05_1355 s_2F1WOG_696 10.96 3,25 16,39 lod 25.0121 0.2
Bourran_2000_2002_QTL5_Delta.F Qrob_Chr11 11 s_1BD29X_620 s_2F1WOG_696 2.94 1,08 16,39 lod 5.936 0.05
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL5_d13Cf Qrob_Chr11 11 s_1BD29X_620 s_1A5BYY_1671 2.26 1,08 11,24 lod 5.8451 0.037

0 Targeting