Protein : Qrob_P0080130.2 Q. robur
Protein Identifier  ? Qrob_P0080130.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=7) K01535 - H+-transporting ATPase [EC:3.6.3.6] Code Enzyme  EC:3.6.3.6
Gene Prediction Quality  validated Protein length 

Sequence

Length: 844  
Kegg Orthology  K01535
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

46 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_015905 1 824 + 824 Gaps:127 98.45 966 70.24 0.0 H(+)-ATPase 11 isoform 1
blastp_kegg lcl|pop:POPTR_0014s04570g 1 824 + 824 Gaps:127 98.55 965 68.77 0.0 H+-ATPase family protein
blastp_kegg lcl|atr:s00111p00107570 1 824 + 824 Gaps:125 94.24 1007 68.28 0.0 AMTR_s00111p00107570 hypothetical protein
blastp_kegg lcl|fve:101290895 1 824 + 824 Gaps:130 98.55 966 67.54 0.0 plasma membrane ATPase 1-like
blastp_kegg lcl|vvi:100246249 1 824 + 824 Gaps:133 98.43 958 69.35 0.0 ATPase 7 plasma membrane-type-like
blastp_kegg lcl|pper:PRUPE_ppa018171mg 5 824 + 820 Gaps:127 98.13 965 68.00 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10018727mg 1 824 + 824 Gaps:129 98.54 959 69.52 0.0 hypothetical protein
blastp_kegg lcl|pxb:103940029 4 824 + 821 Gaps:129 98.14 966 66.98 0.0 plasma membrane ATPase 1-like
blastp_kegg lcl|pop:POPTR_0003s07840g 1 824 + 824 Gaps:128 98.65 961 68.78 0.0 POPTRDRAFT_757063 H+-ATPase family protein
blastp_kegg lcl|cit:102614727 1 824 + 824 Gaps:128 98.54 958 69.39 0.0 ATPase 11 plasma membrane-type-like
blastp_pdb 3b8c_B 7 767 + 761 Gaps:132 98.64 885 63.80 0.0 mol:protein length:885 ATPase 2 plasma membrane-type
blastp_pdb 3b8c_A 7 767 + 761 Gaps:132 98.64 885 63.80 0.0 mol:protein length:885 ATPase 2 plasma membrane-type
blastp_pdb 1mhs_B 32 738 + 707 Gaps:143 86.96 920 32.25 2e-104 mol:protein length:920 Plasma Membrane ATPase
blastp_pdb 1mhs_A 32 738 + 707 Gaps:143 86.96 920 32.25 2e-104 mol:protein length:920 Plasma Membrane ATPase
blastp_pdb 3nan_A 97 538 + 442 Gaps:40 38.73 994 36.10 2e-24 mol:protein length:994 SERCA1a
blastp_pdb 3nam_A 97 538 + 442 Gaps:40 38.73 994 36.10 2e-24 mol:protein length:994 SERCA1a
blastp_pdb 3nal_A 97 538 + 442 Gaps:40 38.73 994 36.10 2e-24 mol:protein length:994 SERCA1a
blastp_pdb 3n8g_A 97 538 + 442 Gaps:40 38.73 994 36.10 2e-24 mol:protein length:994 Sarcoplasmic/endoplasmic reticulum calcium AT
blastp_pdb 3n5k_B 97 538 + 442 Gaps:40 38.73 994 36.10 2e-24 mol:protein length:994 Sarcoplasmic/endoplasmic reticulum calcium AT
blastp_pdb 3n5k_A 97 538 + 442 Gaps:40 38.73 994 36.10 2e-24 mol:protein length:994 Sarcoplasmic/endoplasmic reticulum calcium AT
blastp_uniprot_sprot sp|Q9LV11|PMA11_ARATH 1 810 + 810 Gaps:128 96.86 956 64.90 0.0 ATPase 11 plasma membrane-type OS Arabidopsis thaliana GN AHA11 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LY32|PMA7_ARATH 7 824 + 818 Gaps:131 97.92 961 63.66 0.0 ATPase 7 plasma membrane-type OS Arabidopsis thaliana GN AHA7 PE 2 SV 1
blastp_uniprot_sprot sp|P22180|PMA1_SOLLC 1 810 + 810 Gaps:128 96.86 956 65.12 0.0 Plasma membrane ATPase 1 OS Solanum lycopersicum GN LHA1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SU58|PMA4_ARATH 2 810 + 809 Gaps:129 96.25 960 64.83 0.0 ATPase 4 plasma membrane-type OS Arabidopsis thaliana GN AHA4 PE 1 SV 2
blastp_uniprot_sprot sp|Q08435|PMA1_NICPL 2 810 + 809 Gaps:128 96.66 957 64.00 0.0 Plasma membrane ATPase 1 OS Nicotiana plumbaginifolia GN PMA1 PE 2 SV 1
blastp_uniprot_sprot sp|Q08436|PMA3_NICPL 1 810 + 810 Gaps:128 96.86 956 64.36 0.0 Plasma membrane ATPase 3 OS Nicotiana plumbaginifolia GN PMA3 PE 1 SV 1
blastp_uniprot_sprot sp|Q7XPY2|PMA1_ORYSJ 8 810 + 803 Gaps:135 96.53 951 63.62 0.0 Plasma membrane ATPase OS Oryza sativa subsp. japonica GN Os04g0656100 PE 2 SV 1
blastp_uniprot_sprot sp|Q03194|PMA4_NICPL 4 810 + 807 Gaps:133 96.64 952 62.72 0.0 Plasma membrane ATPase 4 OS Nicotiana plumbaginifolia GN PMA4 PE 1 SV 1
blastp_uniprot_sprot sp|P83970|PMA1_WHEAT 7 810 + 804 Gaps:135 96.64 951 63.00 0.0 Plasma membrane ATPase OS Triticum aestivum GN ha1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M2A0|PMA8_ARATH 9 810 + 802 Gaps:135 96.10 948 62.57 0.0 ATPase 8 plasma membrane-type OS Arabidopsis thaliana GN AHA8 PE 1 SV 1

47 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 645 664 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 275 281 7 PS00154 none E1-E2 ATPases phosphorylation site. IPR018303
Phobius 573 591 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 188 211 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 263 283 21 G3DSA:3.40.1110.10 none none IPR023299
Phobius 665 675 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 173 267 95 SSF81665 none none none
SUPERFAMILY 19 83 65 SSF81665 none none none
SUPERFAMILY 517 737 221 SSF81665 none none none
Phobius 615 644 30 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 212 222 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 447 735 289 G3DSA:1.20.1110.10 none none IPR023298
Phobius 246 510 265 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 223 245 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 81 187 107 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 703 726 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 60 60 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 61 80 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 676 697 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 80 265 186 PF00122 none E1-E2 ATPase IPR008250
SUPERFAMILY 368 521 154 SSF56784 none none IPR023214
SUPERFAMILY 261 327 67 SSF56784 none none IPR023214
Phobius 534 552 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 293 355 63 G3DSA:3.40.1110.10 none none IPR023299
PANTHER 1 743 743 PTHR24093:SF264 none none none
Phobius 727 843 117 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 553 572 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 269 493 225 PF00702 none haloacid dehalogenase-like hydrolase IPR023214
SMART 16 77 62 SM00831 none Cation transporter/ATPase, N-terminus IPR004014
Phobius 511 533 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

8 Localization

Analysis Start End Length
TMHMM 511 532 21
TMHMM 675 697 22
TMHMM 707 726 19
TMHMM 188 210 22
TMHMM 553 572 19
TMHMM 592 614 22
TMHMM 223 245 22
TMHMM 53 75 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting