Protein : Qrob_P0070910.2 Q. robur

Protein Identifier  ? Qrob_P0070910.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) 3.2.2.20 - DNA-3-methyladenine glycosylase I. Code Enzyme  EC:3.2.2.20
Gene Prediction Quality  validated Protein length 

Sequence

Length: 380  
Kegg Orthology  K01246

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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0006281 DNA repair The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
GO:0006284 base-excision repair In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase.
GO:0008725 DNA-3-methyladenine glycosylase activity Catalysis of the reaction: DNA containing 3-methyladenine + H2O = DNA with abasic site + 3-methyladenine. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 3-methyladenine and the deoxyribose sugar to remove the 3-methyladenine, leaving an abasic site.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_037057 1 379 + 379 none 100.00 379 83.64 0.0 DNA glycosylase superfamily protein isoform 1
blastp_kegg lcl|pmum:103341267 1 379 + 379 Gaps:2 99.74 378 81.17 0.0 uncharacterized LOC103341267
blastp_kegg lcl|pper:PRUPE_ppa026720mg 1 379 + 379 Gaps:2 99.74 378 80.64 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0622880 1 379 + 379 Gaps:5 100.00 380 80.00 0.0 DNA-3-methyladenine glycosylase putative (EC:3.2.2.20)
blastp_kegg lcl|gmx:100801026 1 379 + 379 Gaps:4 100.00 383 78.59 0.0 uncharacterized LOC100801026
blastp_kegg lcl|mdm:103446994 1 379 + 379 Gaps:2 99.74 378 78.51 0.0 uncharacterized LOC103446994
blastp_kegg lcl|pop:POPTR_0006s19830g 1 379 + 379 Gaps:6 100.00 381 79.79 0.0 POPTRDRAFT_802190 methyladenine glycosylase family protein
blastp_kegg lcl|pxb:103949071 1 379 + 379 Gaps:2 99.74 378 77.98 0.0 uncharacterized LOC103949071
blastp_kegg lcl|mdm:103456385 1 379 + 379 Gaps:2 99.74 378 77.98 0.0 uncharacterized LOC103456385
blastp_kegg lcl|fve:101313540 1 378 + 378 Gaps:2 87.65 429 77.66 0.0 uncharacterized protein LOC101313540
blastp_pdb 1p7m_A 153 332 + 180 Gaps:2 95.19 187 42.70 5e-46 mol:protein length:187 DNA-3-methyladenine glycosylase I
blastp_pdb 1nku_A 153 332 + 180 Gaps:2 95.19 187 42.70 5e-46 mol:protein length:187 3-Methyladenine Dna Glycosylase I (TAG)
blastp_pdb 1lmz_A 153 332 + 180 Gaps:2 95.19 187 42.70 5e-46 mol:protein length:187 3-methyladenine DNA glycosylase I (TAG)
blastp_pdb 2ofi_A 153 333 + 181 Gaps:2 97.28 184 39.66 8e-43 mol:protein length:184 3-methyladenine DNA glycosylase I constituti
blastp_pdb 2ofk_B 153 333 + 181 Gaps:2 97.81 183 39.66 8e-43 mol:protein length:183 3-methyladenine DNA glycosylase I constituti
blastp_pdb 2ofk_A 153 333 + 181 Gaps:2 97.81 183 39.66 8e-43 mol:protein length:183 3-methyladenine DNA glycosylase I constituti
blastp_pdb 4ai5_E 154 332 + 179 Gaps:2 94.15 188 36.72 1e-32 mol:protein length:188 DNA-3-METHYLADENINE GLYCOSYLASE I
blastp_pdb 4ai5_D 154 332 + 179 Gaps:2 94.15 188 36.72 1e-32 mol:protein length:188 DNA-3-METHYLADENINE GLYCOSYLASE I
blastp_pdb 4ai5_C 154 332 + 179 Gaps:2 94.15 188 36.72 1e-32 mol:protein length:188 DNA-3-METHYLADENINE GLYCOSYLASE I
blastp_pdb 4ai5_B 154 332 + 179 Gaps:2 94.15 188 36.72 1e-32 mol:protein length:188 DNA-3-METHYLADENINE GLYCOSYLASE I
blastp_uniprot_sprot sp|Q7VG78|GUAA_HELHP 133 358 + 226 Gaps:14 16.87 1375 43.10 2e-48 Probable GMP synthase [glutamine-hydrolyzing] OS Helicobacter hepaticus (strain ATCC 51449 / 3B1) GN guaA PE 3 SV 1
blastp_uniprot_sprot sp|P05100|3MG1_ECOLI 153 332 + 180 Gaps:2 95.19 187 42.70 2e-44 DNA-3-methyladenine glycosylase 1 OS Escherichia coli (strain K12) GN tag PE 1 SV 1
blastp_uniprot_sprot sp|P44321|3MGA_HAEIN 154 332 + 179 Gaps:2 95.68 185 40.68 5e-36 DNA-3-methyladenine glycosylase OS Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN tag PE 3 SV 1
rpsblast_cdd gnl|CDD|190612 157 337 + 181 Gaps:2 100.00 179 53.63 3e-79 pfam03352 Adenine_glyco Methyladenine glycosylase. The DNA-3-methyladenine glycosylase I is constitutively expressed and is specific for the alkylated 3-methyladenine DNA.
rpsblast_cdd gnl|CDD|32646 154 338 + 185 Gaps:1 97.87 188 45.11 1e-50 COG2818 Tag 3-methyladenine DNA glycosylase [DNA replication recombination and repair].
rpsblast_cdd gnl|CDD|182401 153 333 + 181 Gaps:2 95.72 187 43.02 2e-41 PRK10353 PRK10353 3-methyl-adenine DNA glycosylase I Provisional.
rpsblast_cdd gnl|CDD|129711 154 335 + 182 Gaps:4 99.44 179 36.52 9e-40 TIGR00624 tag DNA-3-methyladenine glycosylase I. All proteins in this family are alkylation DNA glycosylases that function in base excision repair This family is based on the phylogenomic analysis of JA Eisen (1999 Ph.D. Thesis Stanford University).

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 153 339 187 SSF48150 "Reactome:REACT_216" none IPR011257
Gene3D 153 336 184 G3DSA:1.10.340.30 "Reactome:REACT_216" none IPR011257
PANTHER 1 378 378 PTHR31116:SF1 none none none
PANTHER 1 378 378 PTHR31116 none none none
Pfam 157 336 180 PF03352 none Methyladenine glycosylase IPR005019

0 Localization

0 Qtllist

0 Targeting