Protein : Qrob_P0064510.2 Q. robur
Protein Identifier  ? Qrob_P0064510.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) KOG0483//KOG0488//KOG0493//KOG0494//KOG0843 - Transcription factor HEX contains HOX and HALZ domains [Transcription]. // Transcription factor BarH and related HOX domain proteins [General function prediction only]. // Transcription factor Engrailed contains HOX domain [General function prediction only]. // Transcription factor CHX10 and related HOX domain proteins [General function prediction only]. // Transcription factor EMX1 and related HOX domain proteins [Transcription]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 594  
Kegg Orthology  K09338
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0008289 lipid binding Interacting selectively and non-covalently with a lipid.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101205899 12 589 + 578 Gaps:23 80.59 706 69.24 0.0 homeobox-leucine zipper protein HDG11-like
blastp_kegg lcl|cmo:103496865 12 589 + 578 Gaps:19 80.03 711 69.07 0.0 homeobox-leucine zipper protein HDG11-like
blastp_kegg lcl|vvi:100254711 7 589 + 583 Gaps:27 81.51 714 67.18 0.0 homeobox-leucine zipper protein ROC8-like
blastp_kegg lcl|pxb:103956808 9 589 + 581 Gaps:16 81.75 696 66.96 0.0 homeobox-leucine zipper protein HDG11-like
blastp_kegg lcl|cic:CICLE_v10006467mg 1 588 + 588 Gaps:39 80.99 710 68.70 0.0 hypothetical protein
blastp_kegg lcl|mdm:103421911 7 589 + 583 Gaps:17 81.90 696 66.84 0.0 homeobox-leucine zipper protein HDG11-like
blastp_kegg lcl|mdm:103411772 7 589 + 583 Gaps:17 81.90 696 66.84 0.0 homeobox-leucine zipper protein HDG11-like
blastp_kegg lcl|pper:PRUPE_ppa002343mg 1 589 + 589 Gaps:41 82.04 685 67.97 0.0 hypothetical protein
blastp_kegg lcl|pmum:103327375 1 589 + 589 Gaps:50 81.80 676 67.99 0.0 homeobox-leucine zipper protein ROC8-like
blastp_kegg lcl|pop:POPTR_0004s07310g 1 587 + 587 Gaps:15 78.64 735 65.22 0.0 POPTRDRAFT_198877 hypothetical protein
blastp_pdb 3a01_F 22 84 + 63 none 94.03 67 34.92 5e-06 mol:protein length:67 Homeobox protein aristaless
blastp_pdb 3a01_B 22 84 + 63 none 94.03 67 34.92 5e-06 mol:protein length:67 Homeobox protein aristaless
blastp_pdb 3hdd_B 25 80 + 56 none 93.33 60 42.86 9e-06 mol:protein length:60 ENGRAILED HOMEODOMAIN
blastp_pdb 3hdd_A 25 80 + 56 none 93.33 60 42.86 9e-06 mol:protein length:60 ENGRAILED HOMEODOMAIN
blastp_pdb 1fjl_C 22 83 + 62 none 76.54 81 33.87 9e-06 mol:protein length:81 PAIRED PROTEIN
blastp_pdb 1fjl_B 22 83 + 62 none 76.54 81 33.87 9e-06 mol:protein length:81 PAIRED PROTEIN
blastp_pdb 1fjl_A 22 83 + 62 none 76.54 81 33.87 9e-06 mol:protein length:81 PAIRED PROTEIN
blastp_uniprot_sprot sp|Q69T58|ROC8_ORYSJ 13 590 + 578 Gaps:34 80.00 710 52.64 0.0 Homeobox-leucine zipper protein ROC8 OS Oryza sativa subsp. japonica GN ROC8 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FX31|HDG11_ARATH 22 590 + 569 Gaps:38 77.70 722 51.69 0.0 Homeobox-leucine zipper protein HDG11 OS Arabidopsis thaliana GN HDG11 PE 1 SV 1
blastp_uniprot_sprot sp|Q9M9P4|HDG8_ARATH 7 591 + 585 Gaps:32 81.12 699 48.50 7e-176 Homeobox-leucine zipper protein HDG8 OS Arabidopsis thaliana GN HDG8 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LMT8|HDG12_ARATH 8 590 + 583 Gaps:33 82.68 687 47.89 2e-174 Homeobox-leucine zipper protein HDG12 OS Arabidopsis thaliana GN HDG12 PE 2 SV 1
blastp_uniprot_sprot sp|A3BPF2|ROC7_ORYSJ 20 591 + 572 Gaps:49 73.03 749 47.17 3e-163 Homeobox-leucine zipper protein ROC7 OS Oryza sativa subsp. japonica GN ROC7 PE 2 SV 1
blastp_uniprot_sprot sp|A2YR02|ROC7_ORYSI 14 591 + 578 Gaps:50 73.70 749 46.92 4e-163 Homeobox-leucine zipper protein ROC7 OS Oryza sativa subsp. indica GN ROC7 PE 3 SV 1
blastp_uniprot_sprot sp|Q6ZAR0|ROC1_ORYSJ 6 591 + 586 Gaps:39 72.58 784 44.99 1e-160 Homeobox-leucine zipper protein ROC1 OS Oryza sativa subsp. japonica GN ROC1 PE 2 SV 1
blastp_uniprot_sprot sp|Q93V99|PDF2_ARATH 12 591 + 580 Gaps:50 75.64 743 45.73 1e-159 Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 OS Arabidopsis thaliana GN PDF2 PE 2 SV 1
blastp_uniprot_sprot sp|Q0J9X2|ROC2_ORYSJ 10 589 + 580 Gaps:38 72.19 784 45.41 2e-159 Homeobox-leucine zipper protein ROC2 OS Oryza sativa subsp. japonica GN ROC2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FFI0|HDG9_ARATH 1 588 + 588 Gaps:57 83.15 718 45.39 2e-158 Homeobox-leucine zipper protein HDG9 OS Arabidopsis thaliana GN HDG9 PE 2 SV 1
rpsblast_cdd gnl|CDD|176884 225 451 + 227 Gaps:4 100.00 229 50.66 3e-87 cd08875 START_ArGLABRA2_like C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins. This subfamily includes the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of the Arabidopsis homeobox protein GLABRA 2 and related proteins. The START domain family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. Most proteins in this subgroup contain an N-terminal homeobox DNA-binding domain some contain a leucine zipper. ArGLABRA2 plays a role in the differentiation of hairless epidermal cells of the Arabidopsis root. It acts in a cell-position-dependent manner to suppress root hair formation in those cells.
rpsblast_cdd gnl|CDD|202011 230 452 + 223 Gaps:22 100.00 205 37.07 2e-31 pfam01852 START START domain.
rpsblast_cdd gnl|CDD|197591 231 452 + 222 Gaps:21 100.00 205 29.27 1e-24 smart00234 START in StAR and phosphatidylcholine transfer protein. putative lipid-binding domain in StAR and phosphatidylcholine transfer protein.

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 307 416 110 G3DSA:3.30.530.20 none none IPR023393
ProSiteProfiles 22 82 61 PS50071 none 'Homeobox' domain profile. IPR001356
PANTHER 225 593 369 PTHR24325 none none none
SUPERFAMILY 473 566 94 SSF55961 none none none
Pfam 25 80 56 PF00046 none Homeobox domain IPR001356
SMART 230 452 223 SM00234 none in StAR and phosphatidylcholine transfer protein IPR002913
PANTHER 1 198 198 PTHR24325 none none none
Gene3D 12 84 73 G3DSA:1.10.10.60 none none IPR009057
PANTHER 1 198 198 PTHR24325:SF12 none none none
PANTHER 225 593 369 PTHR24325:SF12 none none none
SMART 24 86 63 SM00389 none Homeodomain IPR001356
ProSitePatterns 57 80 24 PS00027 none 'Homeobox' domain signature. IPR017970
ProSiteProfiles 221 455 235 PS50848 none START domain profile. IPR002913
Coils 124 145 22 Coil none none none
SUPERFAMILY 5 82 78 SSF46689 none none IPR009057
Pfam 232 452 221 PF01852 none START domain IPR002913
SUPERFAMILY 222 454 233 SSF55961 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5

0 Targeting