Protein : Qrob_P0063990.2 Q. robur
Protein Identifier  ? Qrob_P0063990.2 Organism . Name  Quercus robur
Score  37.1 Score Type  egn
Protein Description  (M=1) PTHR11877//PTHR11877:SF17 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 389  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0009058 biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10020530mg 1 388 + 388 Gaps:2 100.00 390 86.15 0.0 hypothetical protein
blastp_kegg lcl|cit:102612892 1 388 + 388 Gaps:2 100.00 390 86.15 0.0 stilbene synthase 3-like
blastp_kegg lcl|tcc:TCM_046994 1 388 + 388 Gaps:4 100.00 386 87.31 0.0 Chalcone and stilbene synthase family protein
blastp_kegg lcl|gmx:100793478 1 388 + 388 none 100.00 388 85.57 0.0 chalcone synthase-like
blastp_kegg lcl|vvi:100259793 1 388 + 388 Gaps:1 100.00 389 85.35 0.0 chalcone synthase A-like
blastp_kegg lcl|pvu:PHAVU_008G141200g 1 388 + 388 Gaps:3 100.00 391 83.63 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0014s05540g 1 388 + 388 Gaps:1 100.00 389 84.83 0.0 chalcone and stilbene synthase family protein
blastp_kegg lcl|mdm:103438969 1 388 + 388 Gaps:7 99.25 398 84.05 0.0 chalcone synthase
blastp_kegg lcl|pop:POPTR_0955s00200g 1 388 + 388 none 100.00 388 83.25 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0002s14240g 1 388 + 388 none 100.00 388 83.25 0.0 chalcone and stilbene synthase family protein
blastp_pdb 3awk_A 18 388 + 371 Gaps:8 94.28 402 42.74 3e-106 mol:protein length:402 Chalcone synthase-like polyketide synthase
blastp_pdb 3awj_B 18 388 + 371 Gaps:8 94.28 402 42.74 3e-106 mol:protein length:402 Chalcone synthase-like polyketide synthase
blastp_pdb 3awj_A 18 388 + 371 Gaps:8 94.28 402 42.74 3e-106 mol:protein length:402 Chalcone synthase-like polyketide synthase
blastp_pdb 2p0u_B 14 388 + 375 Gaps:9 92.98 413 43.75 2e-104 mol:protein length:413 Stilbenecarboxylate synthase 2
blastp_pdb 2p0u_A 14 388 + 375 Gaps:9 92.98 413 43.75 2e-104 mol:protein length:413 Stilbenecarboxylate synthase 2
blastp_pdb 2d52_B 24 388 + 365 Gaps:11 92.61 406 41.22 1e-97 mol:protein length:406 pentaketide chromone synthase
blastp_pdb 2d52_A 24 388 + 365 Gaps:11 92.61 406 41.22 1e-97 mol:protein length:406 pentaketide chromone synthase
blastp_pdb 2d51_B 24 388 + 365 Gaps:11 92.61 406 41.22 1e-97 mol:protein length:406 pentaketide chromone synthase
blastp_pdb 2d51_A 24 388 + 365 Gaps:11 92.61 406 41.22 1e-97 mol:protein length:406 pentaketide chromone synthase
blastp_pdb 1bq6_A 24 388 + 365 Gaps:8 96.13 388 40.48 1e-97 mol:protein length:388 CHALCONE SYNTHASE
blastp_uniprot_sprot sp|P08894|CHSA_PETHY 24 388 + 365 Gaps:8 95.89 389 43.97 6e-104 Chalcone synthase A OS Petunia hybrida GN CHSA PE 2 SV 1
blastp_uniprot_sprot sp|P22928|CHSJ_PETHY 24 388 + 365 Gaps:8 95.89 389 43.43 3e-102 Chalcone synthase J OS Petunia hybrida GN CHSJ PE 2 SV 2
blastp_uniprot_sprot sp|A5C9M2|THS5_VITVI 24 388 + 365 Gaps:10 95.15 392 42.36 3e-102 Stilbene synthase 5 OS Vitis vinifera GN GSVIVT00007357001 PE 3 SV 1
blastp_uniprot_sprot sp|P51075|CHSY_BETPN 24 388 + 365 Gaps:8 94.43 395 43.97 4e-102 Chalcone synthase OS Betula pendula GN CHS PE 2 SV 2
blastp_uniprot_sprot sp|P51071|THS3_VITVI 24 388 + 365 Gaps:8 95.15 392 42.63 5e-102 Stilbene synthase 3 OS Vitis vinifera GN VIT_16s0100g01030 PE 2 SV 2
blastp_uniprot_sprot sp|P06515|CHSY_ANTMA 24 388 + 365 Gaps:8 95.64 390 42.90 6e-102 Chalcone synthase OS Antirrhinum majus GN CHS PE 3 SV 1
blastp_uniprot_sprot sp|P51070|THS2_VITVI 24 388 + 365 Gaps:10 95.15 392 42.36 7e-102 Stilbene synthase 2 OS Vitis vinifera GN GSVIVT00004047001 PE 2 SV 2
blastp_uniprot_sprot sp|A2ICC6|THS7_VITVI 24 388 + 365 Gaps:10 95.15 392 42.09 1e-101 Stilbene synthase 6 OS Vitis vinifera GN STS PE 2 SV 1
blastp_uniprot_sprot sp|P28343|THS1_VITVI 24 388 + 365 Gaps:10 95.15 392 42.09 1e-101 Stilbene synthase 1 OS Vitis vinifera GN VINST1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9AU11|PKS1_RUBID 24 388 + 365 Gaps:8 95.40 391 42.90 1e-101 Polyketide synthase 1 OS Rubus idaeus GN PKS1 PE 1 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 22 241 220 G3DSA:3.40.47.10 none none IPR016038
Gene3D 244 387 144 G3DSA:3.40.47.10 none none IPR016038
Pfam 17 236 220 PF00195 none Chalcone and stilbene synthases, N-terminal domain IPR001099
PANTHER 8 386 379 PTHR11877:SF17 none none none
Coils 318 339 22 Coil none none none
Pfam 246 388 143 PF02797 none Chalcone and stilbene synthases, C-terminal domain IPR012328
SUPERFAMILY 18 239 222 SSF53901 none none IPR016039
PIRSF 12 388 377 PIRSF000451 none none IPR011141
SUPERFAMILY 223 387 165 SSF53901 none none IPR016039
PANTHER 8 386 379 PTHR11877 none none none

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 103   Mitochondrion 5 0.051 0.477 NON-PLANT 103