4 GO Terms
| Identifier | Name | Description |
|---|---|---|
| GO:0009522 | photosystem I | A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation). |
| GO:0015979 | photosynthesis | The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds. |
| GO:0005516 | calmodulin binding | Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states. |
| GO:0042651 | thylakoid membrane | The pigmented membrane of any thylakoid. |
11 Blast
| Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
|---|---|---|---|---|---|---|---|---|---|---|---|
| blastp_kegg | lcl|cit:102627099 | 1 | 132 | + | 132 | Gaps:6 | 100.00 | 138 | 72.46 | 8e-63 | uncharacterized LOC102627099 |
| blastp_kegg | lcl|cam:101515656 | 2 | 132 | + | 131 | Gaps:7 | 98.48 | 132 | 76.92 | 1e-61 | uncharacterized LOC101515656 |
| blastp_kegg | lcl|cic:CICLE_v10029547mg | 1 | 132 | + | 132 | Gaps:6 | 100.00 | 138 | 71.74 | 1e-61 | hypothetical protein |
| blastp_kegg | lcl|mdm:103415213 | 1 | 132 | + | 132 | Gaps:1 | 100.00 | 131 | 69.47 | 1e-60 | uncharacterized LOC103415213 |
| blastp_kegg | lcl|pxb:103964444 | 1 | 132 | + | 132 | Gaps:1 | 100.00 | 131 | 68.70 | 5e-60 | uncharacterized LOC103964444 |
| blastp_kegg | lcl|pxb:103935825 | 1 | 132 | + | 132 | Gaps:1 | 100.00 | 131 | 67.94 | 3e-59 | uncharacterized LOC103935825 |
| blastp_kegg | lcl|pper:PRUPE_ppa013284mg | 1 | 132 | + | 132 | Gaps:1 | 100.00 | 131 | 68.70 | 4e-58 | hypothetical protein |
| blastp_kegg | lcl|tcc:TCM_007250 | 1 | 132 | + | 132 | Gaps:15 | 100.00 | 147 | 63.95 | 2e-57 | Cell cycle progression protein 1 |
| blastp_kegg | lcl|pop:POPTR_0001s29940g | 1 | 132 | + | 132 | Gaps:3 | 100.00 | 135 | 70.37 | 5e-57 | POPTRDRAFT_829854 hypothetical protein |
| blastp_kegg | lcl|pvu:PHAVU_007G046800g | 1 | 132 | + | 132 | Gaps:2 | 100.00 | 132 | 68.94 | 8e-57 | hypothetical protein |
| rpsblast_cdd | gnl|CDD|165653 | 28 | 132 | + | 105 | Gaps:3 | 88.52 | 122 | 53.70 | 5e-21 | PLN00078 PLN00078 photosystem I reaction center subunit N (PsaN) Provisional. |
6 Qtllist
| Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
|---|---|---|---|---|---|---|---|---|---|---|
| Bourran2_2015_nEpis_3P | Qrob_Chr12 | 12 | s_1AOES6_1466 | s_1B0DDG_1094 | 28,97 | 28,55 | 30,1 | lod | 3.6 | 8.4 |
| Champenoux_2015_nEpis_3P | Qrob_Chr11 | 11 | s_1DG9PM_867 | s_1BZ083_1312 | 26,53 | 25,47 | 27,72 | lod | 4.4 | 8.9 |
| Bourran2_2014_nP_A4 | Qrob_Chr11 | 11 | s_1B58GB_1413 | s_1A5BYY_1671 | 11,15 | 0 | 42,38 | lod | 1,8913 | 4,5 |
| Bourran2_2002_QTL16_peak_Bud_burst_A4 | Qrob_Chr11 | 11 | s_A9OIA_166 | s_1C6WBF_114 | 21,23 | 2,83 | 42,83 | lod | 5,1 | 7,2 |
| Bourran2_2015_nSeqBC_3P | Qrob_Chr11 | 11 | s_1DG9PM_867 | s_1BZ083_1312 | 26,06 | 25,47 | 27,72 | lod | 3.6 | 7.1 |
| Champenoux_2015_nSecLBD_3P | Qrob_Chr11 | 11 | s_1DG9PM_867 | s_1BZ083_1312 | 25,78 | 25,47 | 27,72 | lod | 6.3 | 16.6 |
