Protein : Qrob_P0050040.2 Q. robur
Protein Identifier  ? Qrob_P0050040.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=4) PTHR24064:SF168 - TRANSPORTER SVOPL-RELATED (PTHR24064:SF168) Code Enzyme  EC:3.6.3.27
Gene Prediction Quality  validated Protein length 

Sequence

Length: 539  
Kegg Orthology  K08176
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.
GO:0005315 inorganic phosphate transmembrane transporter activity Enables the transfer of a inorganic phosphate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport.
GO:0006817 phosphate ion transport The directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1017990 3 538 + 536 Gaps:5 99.44 534 81.92 0.0 inorganic phosphate transporter putative
blastp_kegg lcl|pop:POPTR_0001s32590g 3 537 + 535 Gaps:6 99.25 535 81.73 0.0 POPTRDRAFT_174800 inorganic phosphate transporter family protein
blastp_kegg lcl|cic:CICLE_v10004694mg 4 538 + 535 Gaps:2 99.26 537 80.86 0.0 hypothetical protein
blastp_kegg lcl|cit:102610126 4 538 + 535 Gaps:4 99.26 537 81.05 0.0 probable inorganic phosphate transporter 1-7-like
blastp_kegg lcl|tcc:TCM_020881 3 538 + 536 Gaps:2 99.44 537 80.34 0.0 Phosphate transporter 1 7 isoform 1
blastp_kegg lcl|sot:102589908 1 538 + 538 Gaps:2 100.00 538 79.00 0.0 inorganic phosphate transporter 1-4-like
blastp_kegg lcl|pop:POPTR_0005s24500g 1 537 + 537 Gaps:4 99.63 539 78.77 0.0 POPTRDRAFT_559687 phosphate transporter 1 family protein
blastp_kegg lcl|gmx:100795623 1 538 + 538 Gaps:5 100.00 533 79.55 0.0 PHT1-3 PHT1 probable inorganic phosphate transporter 1-7-like
blastp_kegg lcl|sly:544136 1 538 + 538 Gaps:2 100.00 538 79.18 0.0 uncharacterized LOC544136
blastp_kegg lcl|gmx:100780201 1 538 + 538 Gaps:5 100.00 533 79.17 0.0 PHT1-14 probable inorganic phosphate transporter 1-7-like
blastp_uniprot_sprot sp|Q8GYF4|PHT15_ARATH 7 538 + 532 Gaps:5 98.71 542 77.20 0.0 Probable inorganic phosphate transporter 1-5 OS Arabidopsis thaliana GN PHT1-5 PE 2 SV 2
blastp_uniprot_sprot sp|O48639|PHT13_ARATH 3 523 + 521 Gaps:3 99.42 521 78.57 0.0 Probable inorganic phosphate transporter 1-3 OS Arabidopsis thaliana GN PHT1-3 PE 2 SV 1
blastp_uniprot_sprot sp|Q494P0|PHT17_ARATH 4 523 + 520 Gaps:6 96.07 535 79.18 0.0 Probable inorganic phosphate transporter 1-7 OS Arabidopsis thaliana GN PHT1-7 PE 2 SV 2
blastp_uniprot_sprot sp|Q8VYM2|PHT11_ARATH 3 525 + 523 Gaps:3 99.24 524 77.50 0.0 Inorganic phosphate transporter 1-1 OS Arabidopsis thaliana GN PHT1-1 PE 1 SV 2
blastp_uniprot_sprot sp|Q8H6H2|PHT14_ORYSJ 1 537 + 537 Gaps:5 99.26 538 75.09 0.0 Probable inorganic phosphate transporter 1-4 OS Oryza sativa subsp. japonica GN PHT1-4 PE 2 SV 1
blastp_uniprot_sprot sp|Q01MW8|PHT14_ORYSI 1 537 + 537 Gaps:5 99.26 538 75.09 0.0 Probable inorganic phosphate transporter 1-4 OS Oryza sativa subsp. indica GN PHT1-4 PE 2 SV 2
blastp_uniprot_sprot sp|Q96303|PHT14_ARATH 3 538 + 536 Gaps:6 99.25 534 76.04 0.0 Inorganic phosphate transporter 1-4 OS Arabidopsis thaliana GN PHT1-4 PE 1 SV 1
blastp_uniprot_sprot sp|Q7X7V2|PHT15_ORYSJ 1 537 + 537 Gaps:5 98.91 548 72.32 0.0 Probable inorganic phosphate transporter 1-5 OS Oryza sativa subsp. japonica GN PHT1-5 PE 2 SV 2
blastp_uniprot_sprot sp|Q96243|PHT12_ARATH 3 525 + 523 Gaps:3 99.24 524 77.31 0.0 Probable inorganic phosphate transporter 1-2 OS Arabidopsis thaliana GN PHT1-2 PE 1 SV 2
blastp_uniprot_sprot sp|Q8H6G8|PHT18_ORYSJ 3 525 + 523 Gaps:4 95.93 541 76.69 0.0 Probable inorganic phosphate transporter 1-8 OS Oryza sativa subsp. japonica GN PHT1-8 PE 2 SV 1
rpsblast_cdd gnl|CDD|129965 10 518 + 509 Gaps:17 100.00 502 57.97 0.0 TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
rpsblast_cdd gnl|CDD|200987 25 516 + 492 Gaps:74 98.89 449 25.23 1e-31 pfam00083 Sugar_tr Sugar (and other) transporter.
rpsblast_cdd gnl|CDD|162084 79 515 + 437 Gaps:80 82.95 481 29.32 7e-23 TIGR00879 SP MFS transporter sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083).
rpsblast_cdd gnl|CDD|162095 7 458 + 452 Gaps:68 97.99 398 25.64 2e-22 TIGR00895 2A0115 benzoate transport.
rpsblast_cdd gnl|CDD|188094 30 254 + 225 Gaps:20 53.05 394 24.40 9e-16 TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083) including citrate-H+ symporters dicarboxylate:H+ symporters the proline/glycine-betaine transporter ProP etc.
rpsblast_cdd gnl|CDD|182225 13 517 + 505 Gaps:87 97.70 479 27.56 6e-15 PRK10077 xylE D-xylose transporter XylE Provisional.
rpsblast_cdd gnl|CDD|119392 24 190 + 167 Gaps:16 42.90 352 26.49 5e-13 cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters symporters and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions sugar phosphates drugs neurotransmitters nucleosides amino acids and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate while symporters and antiporters transport two substrates in the same or in opposite directions respectively across membranes. MFS proteins are typically 400 to 600 amino acids in length and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members GlpT (glycerol-3-phosphate transporter) LacY (lactose permease) and EmrD (multidrug transporter) MFS proteins are thought to function through a single substrate binding site alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4 which is impaired in type II diabetes and glucose-6-phosphate transporter (G6PT) which causes glycogen storage disease when mutated..
rpsblast_cdd gnl|CDD|162097 77 514 + 438 Gaps:86 72.87 505 20.92 2e-12 TIGR00898 2A0119 cation transport protein.
rpsblast_cdd gnl|CDD|182611 11 250 + 240 Gaps:53 44.69 490 30.59 4e-12 PRK10642 PRK10642 proline/glycine betaine transporter Provisional.
rpsblast_cdd gnl|CDD|162092 23 249 + 227 Gaps:37 46.91 405 25.79 3e-10 TIGR00891 2A0112 putative sialic acid transporter.

35 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 232 295 64 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 372 377 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 442 465 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 26 516 491 PF00083 none Sugar (and other) transporter IPR005828
SUPERFAMILY 11 516 506 SSF103473 none none IPR020846
Phobius 190 211 22 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 124 141 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 485 504 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 399 403 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 351 371 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 162 189 28 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 21 48 28 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 404 421 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 212 231 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 214 534 321 PTHR24064:SF168 none none none
PANTHER 7 187 181 PTHR24064:SF168 none none none
Phobius 466 484 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 142 161 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 214 534 321 PTHR24064 none none none
PANTHER 7 187 181 PTHR24064 none none none
Phobius 88 98 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 300 518 219 G3DSA:1.20.1250.20 none none none
Phobius 99 118 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 23 509 487 PS50850 none Major facilitator superfamily (MFS) profile. IPR020846
Phobius 422 441 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 49 67 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 296 315 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
TIGRFAM 10 518 509 TIGR00887 none 2A0109: phosphate:H+ symporter IPR004738
Phobius 1 20 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 64 233 170 G3DSA:1.20.1250.20 none none none

11 Localization

Analysis Start End Length
TMHMM 99 121 22
TMHMM 22 44 22
TMHMM 408 430 22
TMHMM 443 465 22
TMHMM 345 367 22
TMHMM 131 150 19
TMHMM 485 504 19
TMHMM 163 185 22
TMHMM 374 393 19
TMHMM 212 231 19
TMHMM 297 314 17

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting