Protein : Qrob_P0049520.2 Q. robur
Protein Identifier  ? Qrob_P0049520.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR13168 - ASSOCIATE OF C-MYC (AMY-1) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 92  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003713 transcription coactivator activity Interacting selectively and non-covalently with a activating transcription factor and also with the basal transcription machinery in order to increase the frequency, rate or extent of transcription. Cofactors generally do not bind the template nucleic acid, but rather mediate protein-protein interactions between activating transcription factors and the basal transcription machinery.

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102625058 7 89 + 83 none 90.22 92 86.75 3e-43 c-Myc-binding protein-like
blastp_kegg lcl|tcc:TCM_026255 1 89 + 89 none 53.29 167 79.78 3e-43 Uncharacterized protein isoform 1
blastp_kegg lcl|mus:103982484 7 89 + 83 none 77.57 107 83.13 2e-42 C-Myc-binding protein homolog
blastp_kegg lcl|cit:102607982 7 89 + 83 none 20.05 414 86.75 1e-40 uncharacterized LOC102607982
blastp_kegg lcl|vvi:100251329 6 88 + 83 none 50.92 163 80.72 3e-40 uncharacterized LOC100251329
blastp_kegg lcl|cic:CICLE_v10022930mg 1 89 + 89 none 77.39 115 86.52 4e-40 hypothetical protein
blastp_kegg lcl|cit:102617129 1 89 + 89 none 77.39 115 86.52 4e-40 c-Myc-binding protein-like
blastp_kegg lcl|sot:102593996 7 89 + 83 none 70.94 117 79.52 2e-39 c-Myc-binding protein-like
blastp_kegg lcl|sly:101250593 7 89 + 83 none 70.94 117 80.72 2e-39 c-Myc-binding protein-like
blastp_kegg lcl|crb:CARUB_v10014931mg 1 89 + 89 none 72.36 123 85.39 2e-39 hypothetical protein
blastp_uniprot_sprot sp|Q5R7A8|MYCBP_PONAB 2 83 + 82 Gaps:2 81.55 103 46.43 4e-19 C-Myc-binding protein OS Pongo abelii GN MYCBP PE 3 SV 3
blastp_uniprot_sprot sp|Q2TBP7|MYCBP_BOVIN 2 83 + 82 Gaps:2 81.55 103 46.43 4e-19 C-Myc-binding protein OS Bos taurus GN MYCBP PE 3 SV 3
blastp_uniprot_sprot sp|Q99417|MYCBP_HUMAN 2 83 + 82 Gaps:2 81.55 103 46.43 4e-19 C-Myc-binding protein OS Homo sapiens GN MYCBP PE 1 SV 3
blastp_uniprot_sprot sp|Q9EQS3|MYCBP_MOUSE 2 83 + 82 Gaps:2 81.55 103 46.43 7e-19 C-Myc-binding protein OS Mus musculus GN Mycbp PE 2 SV 5
blastp_uniprot_sprot sp|Q54I57|MYCBP_DICDI 10 78 + 69 Gaps:7 84.44 90 53.95 6e-16 C-Myc-binding protein homolog OS Dictyostelium discoideum GN mycbp PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 61 89 29 Coil none none none
PANTHER 1 90 90 PTHR13168 none none IPR026060
PRINTS 9 19 11 PR02028 none C-Myc-binding protein signature none
PRINTS 19 33 15 PR02028 none C-Myc-binding protein signature none
PRINTS 33 47 15 PR02028 none C-Myc-binding protein signature none
PANTHER 1 90 90 PTHR13168:SF0 none none none

0 Localization

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting