Protein : Qrob_P0048500.2 Q. robur
Protein Identifier  ? Qrob_P0048500.2 Organism . Name  Quercus robur
Score  23.0 Score Type  egn
Protein Description  (M=1) PF00916//PF13792 - Sulfate transporter family // Sulfate transporter N-terminal domain with GLY motif Gene Prediction Quality  validated
Protein length 

Sequence

Length: 394  
Kegg Orthology  K17470
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0005886 plasma membrane The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
GO:0008271 secondary active sulfate transmembrane transporter activity Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport.
GO:0008272 sulfate transport The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0015116 sulfate transmembrane transporter activity Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0002s09310g 9 392 + 384 none 59.53 645 75.52 0.0 POPTRDRAFT_551540 high affinity sulfate transporter family protein
blastp_kegg lcl|pop:POPTR_0005s16530g 9 392 + 384 Gaps:1 59.51 647 75.32 0.0 POPTRDRAFT_760831 high affinity sulfate transporter family protein
blastp_kegg lcl|rcu:RCOM_1033950 6 392 + 387 Gaps:2 57.72 667 75.58 0.0 sulfate transporter putative
blastp_kegg lcl|pper:PRUPE_ppa024463mg 1 392 + 392 Gaps:16 61.08 668 71.57 0.0 hypothetical protein
blastp_kegg lcl|mdm:103401023 8 392 + 385 none 58.33 660 74.03 0.0 sulfate transporter 1.2-like
blastp_kegg lcl|pmum:103319166 1 392 + 392 Gaps:16 61.08 668 71.57 0.0 sulfate transporter 1.3-like
blastp_kegg lcl|cic:CICLE_v10000528mg 6 392 + 387 none 58.73 659 74.42 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_034964 6 392 + 387 none 55.68 695 73.39 0.0 Sulfate transporter 1 3 isoform 1
blastp_kegg lcl|pxb:103966542 8 392 + 385 none 58.33 660 74.03 0.0 sulfate transporter 1.2-like
blastp_kegg lcl|pxb:103959034 8 392 + 385 none 58.33 660 74.03 0.0 sulfate transporter 1.2
blastp_uniprot_sprot sp|Q9FEP7|SUT13_ARATH 1 392 + 392 Gaps:7 60.21 656 67.85 0.0 Sulfate transporter 1.3 OS Arabidopsis thaliana GN SULTR1 3 PE 2 SV 1
blastp_uniprot_sprot sp|P53392|SUT2_STYHA 1 392 + 392 Gaps:12 60.73 662 69.15 0.0 High affinity sulfate transporter 2 OS Stylosanthes hamata GN ST2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9MAX3|SUT12_ARATH 16 392 + 377 Gaps:14 59.88 653 68.80 0.0 Sulfate transporter 1.2 OS Arabidopsis thaliana GN SULTR1 2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SAY1|SUT11_ARATH 12 392 + 381 Gaps:3 58.24 649 68.78 0.0 Sulfate transporter 1.1 OS Arabidopsis thaliana GN SULTR1 1 PE 1 SV 2
blastp_uniprot_sprot sp|P53391|SUT1_STYHA 1 392 + 392 Gaps:17 61.02 667 68.55 0.0 High affinity sulfate transporter 1 OS Stylosanthes hamata GN ST1 PE 2 SV 1
blastp_uniprot_sprot sp|O04722|SUT21_ARATH 21 392 + 372 Gaps:11 53.32 677 57.34 2e-141 Sulfate transporter 2.1 OS Arabidopsis thaliana GN SULTR2 1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SV13|SUT31_ARATH 14 392 + 379 Gaps:5 58.05 658 53.14 9e-140 Sulfate transporter 3.1 OS Arabidopsis thaliana GN SULTR3 1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SXS2|SUT33_ARATH 26 392 + 367 Gaps:1 58.00 631 52.73 3e-138 Probable sulfate transporter 3.3 OS Arabidopsis thaliana GN SULTR3 3 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LW86|SUT34_ARATH 3 392 + 390 Gaps:1 59.57 653 48.84 7e-134 Probable sulfate transporter 3.4 OS Arabidopsis thaliana GN SULTR3 4 PE 2 SV 1
blastp_uniprot_sprot sp|P92946|SUT22_ARATH 62 392 + 331 none 48.89 677 58.31 7e-133 Sulfate transporter 2.2 OS Arabidopsis thaliana GN SULTR2 2 PE 1 SV 3
rpsblast_cdd gnl|CDD|162054 77 392 + 316 Gaps:4 56.13 563 51.27 1e-113 TIGR00815 sulP high affinity sulphate transporter 1. The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria fungi plants and animals. Many organisms including Bacillus subtilis Synechocystis sp Saccharomyces cerevisiae Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized and all are sulfate uptake transporters. Some transport their substrate with high affinities while others transport it with relatively low affinities. Most function by SO42- :H+symport but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis a second bears two proteins one from M. tuberculosis the other from Synechocystis sp and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
rpsblast_cdd gnl|CDD|144493 189 392 + 204 Gaps:1 72.76 279 50.25 2e-63 pfam00916 Sulfate_transp Sulfate transporter family. Mutations in human SLC26A2 lead to several human diseases.
rpsblast_cdd gnl|CDD|31004 72 392 + 321 Gaps:20 54.69 554 32.34 7e-48 COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].
rpsblast_cdd gnl|CDD|205965 76 157 + 82 none 98.80 83 57.32 1e-32 pfam13792 Sulfate_tra_GLY Sulfate transporter N-terminal domain with GLY motif. This domain is found usually at the N-terminus of sulfate-transporter proteins. It carries a highly conserved GLY sequence motif but the function of the domain is not known.
rpsblast_cdd gnl|CDD|183265 64 298 + 235 Gaps:24 38.56 568 27.85 2e-19 PRK11660 PRK11660 putative transporter Provisional.
rpsblast_kog gnl|CDD|35457 16 392 + 377 Gaps:13 57.44 665 40.05 5e-95 KOG0236 KOG0236 KOG0236 Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism].

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 132 154 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 280 301 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 252 274 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 64 64 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 65 82 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 220 251 32 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 76 157 82 PF13792 none Sulfate transporter N-terminal domain with GLY motif IPR030402
ProSitePatterns 119 140 22 PS01130 none SLC26A transporters signature. IPR018045
Phobius 94 112 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 16 392 377 PTHR11814 "Reactome:REACT_15518";signature_desc=SULFATE TRANSPORTER none IPR001902
PANTHER 16 392 377 PTHR11814:SF65 none none IPR030314
TIGRFAM 77 392 316 TIGR00815 "Reactome:REACT_15518" sulP: sulfate permease IPR001902
Phobius 200 219 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 195 199 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 302 393 92 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 189 392 204 PF00916 none Sulfate transporter family IPR011547
Phobius 155 173 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 275 279 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 113 131 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 174 194 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 83 93 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

6 Localization

Analysis Start End Length
TMHMM 203 222 19
TMHMM 340 362 22
TMHMM 142 159 17
TMHMM 174 196 22
TMHMM 280 302 22
TMHMM 251 273 22

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2

0 Targeting