Protein : Qrob_P0047070.2 Q. robur
Protein Identifier  ? Qrob_P0047070.2 Organism . Name  Quercus robur
Score  97.1 Score Type  egn
Protein Description  (M=5) K04354 - protein phosphatase 2 (formerly 2A), regulatory subunit B Gene Prediction Quality  validated
Protein length 

Sequence

Length: 531  
Kegg Orthology  K04354
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0000159 protein phosphatase type 2A complex A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit.
GO:0008601 protein phosphatase type 2A regulator activity Modulation of the activity of the enzyme protein phosphatase type 2A.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100243351 1 530 + 530 Gaps:23 100.00 507 76.13 0.0 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
blastp_kegg lcl|pop:POPTR_0015s09060g 8 530 + 523 Gaps:23 97.69 520 73.62 0.0 POPTRDRAFT_575190 hypothetical protein
blastp_kegg lcl|tcc:TCM_012106 4 530 + 527 Gaps:26 98.24 512 76.74 0.0 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform 1
blastp_kegg lcl|fve:101306234 1 530 + 530 Gaps:25 100.00 505 76.44 0.0 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
blastp_kegg lcl|pper:PRUPE_ppa004483mg 1 530 + 530 Gaps:23 100.00 507 77.51 0.0 hypothetical protein
blastp_kegg lcl|pmum:103343111 1 530 + 530 Gaps:23 100.00 509 77.21 0.0 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
blastp_kegg lcl|rcu:RCOM_1510290 1 530 + 530 Gaps:24 100.00 506 75.89 0.0 protein phosphatase pp2a regulatory subunit B putative
blastp_kegg lcl|cit:102628048 1 530 + 530 Gaps:33 100.00 501 73.85 0.0 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
blastp_kegg lcl|pxb:103952997 1 530 + 530 Gaps:28 100.00 516 75.19 0.0 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
blastp_kegg lcl|mdm:103455205 1 530 + 530 Gaps:28 100.00 516 75.39 0.0 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
blastp_pdb 3dw8_E 14 528 + 515 Gaps:94 96.87 447 49.88 2e-127 mol:protein length:447 Serine/threonine-protein phosphatase 2A 55 kD
blastp_pdb 3dw8_B 14 528 + 515 Gaps:94 96.87 447 49.88 2e-127 mol:protein length:447 Serine/threonine-protein phosphatase 2A 55 kD
blastp_uniprot_sprot sp|Q39247|2ABB_ARATH 4 530 + 527 Gaps:47 98.60 501 61.34 0.0 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS Arabidopsis thaliana GN PP2AB2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5Z8Z7|2ABA_ORYSJ 14 530 + 517 Gaps:29 85.03 581 60.12 0.0 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS Oryza sativa subsp. japonica GN Os06g0563300 PE 2 SV 2
blastp_uniprot_sprot sp|Q0E2P1|2ABB_ORYSJ 15 530 + 516 Gaps:35 94.29 525 60.81 0.0 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS Oryza sativa subsp. japonica GN Os02g0224200 PE 2 SV 1
blastp_uniprot_sprot sp|A2X2K3|2ABB_ORYSI 15 530 + 516 Gaps:35 94.29 525 60.81 0.0 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS Oryza sativa subsp. indica GN OsI_006296 PE 2 SV 2
blastp_uniprot_sprot sp|Q38821|2ABA_ARATH 11 530 + 520 Gaps:37 97.27 513 59.12 0.0 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS Arabidopsis thaliana GN PP2AB1 PE 1 SV 2
blastp_uniprot_sprot sp|Q12702|2ABA_SCHPO 16 528 + 513 Gaps:89 97.19 463 52.89 3e-141 Protein phosphatase PP2A regulatory subunit B OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN pab1 PE 1 SV 2
blastp_uniprot_sprot sp|Q6DIY3|2ABD_XENTR 16 528 + 513 Gaps:84 96.42 447 52.90 8e-133 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS Xenopus tropicalis GN ppp2r2d PE 2 SV 1
blastp_uniprot_sprot sp|Q5ZIY5|2ABD_CHICK 14 528 + 515 Gaps:82 96.01 451 51.73 4e-131 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS Gallus gallus GN PPP2R2D PE 2 SV 1
blastp_uniprot_sprot sp|Q66LE6|2ABD_HUMAN 16 528 + 513 Gaps:82 95.14 453 51.97 9e-131 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS Homo sapiens GN PPP2R2D PE 2 SV 1
blastp_uniprot_sprot sp|Q7ZX64|2ABD_XENLA 16 528 + 513 Gaps:84 96.42 447 51.51 4e-130 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS Xenopus laevis GN ppp2r2d PE 1 SV 1
rpsblast_cdd gnl|CDD|34770 15 530 + 516 Gaps:75 98.48 460 44.15 1e-106 COG5170 CDC55 Serine/threonine protein phosphatase 2A regulatory subunit [Signal transduction mechanisms].
rpsblast_kog gnl|CDD|36568 6 530 + 525 Gaps:93 99.77 433 51.85 1e-135 KOG1354 KOG1354 KOG1354 Serine/threonine protein phosphatase 2A regulatory subunit [Signal transduction mechanisms].

28 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PIRSF 4 530 527 PIRSF037309 none none IPR000009
Gene3D 234 443 210 G3DSA:2.130.10.10 none none IPR015943
Gene3D 130 169 40 G3DSA:2.130.10.10 none none IPR015943
Gene3D 494 523 30 G3DSA:2.130.10.10 none none IPR015943
Gene3D 37 71 35 G3DSA:2.130.10.10 none none IPR015943
PANTHER 4 180 177 PTHR11871 none none IPR000009
ProSitePatterns 123 137 15 PS01024 none Protein phosphatase 2A regulatory subunit PR55 signature 1. IPR018067
SMART 494 530 37 SM00320 none WD40 repeats IPR001680
SMART 123 163 41 SM00320 none WD40 repeats IPR001680
SMART 387 441 55 SM00320 none WD40 repeats IPR001680
SMART 27 62 36 SM00320 none WD40 repeats IPR001680
SMART 236 275 40 SM00320 none WD40 repeats IPR001680
SMART 279 326 48 SM00320 none WD40 repeats IPR001680
SMART 345 383 39 SM00320 none WD40 repeats IPR001680
SUPERFAMILY 35 76 42 SSF50978 none none IPR017986
SUPERFAMILY 119 170 52 SSF50978 none none IPR017986
SUPERFAMILY 504 523 20 SSF50978 none none IPR017986
SUPERFAMILY 241 444 204 SSF50978 none none IPR017986
PRINTS 388 413 26 PR00600 none Protein phosphatase PP2A 55kDa regulatory subunit signature IPR000009
PRINTS 303 331 29 PR00600 none Protein phosphatase PP2A 55kDa regulatory subunit signature IPR000009
PRINTS 360 387 28 PR00600 none Protein phosphatase PP2A 55kDa regulatory subunit signature IPR000009
PRINTS 414 440 27 PR00600 none Protein phosphatase PP2A 55kDa regulatory subunit signature IPR000009
PRINTS 41 61 21 PR00600 none Protein phosphatase PP2A 55kDa regulatory subunit signature IPR000009
PRINTS 499 528 30 PR00600 none Protein phosphatase PP2A 55kDa regulatory subunit signature IPR000009
PRINTS 332 359 28 PR00600 none Protein phosphatase PP2A 55kDa regulatory subunit signature IPR000009
PANTHER 4 180 177 PTHR11871:SF0 none none none
PANTHER 217 530 314 PTHR11871:SF0 none none none
PANTHER 217 530 314 PTHR11871 none none IPR000009

0 Localization

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2

0 Targeting