Protein : Qrob_P0046000.2 Q. robur
Protein Identifier  ? Qrob_P0046000.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR23430:SF50 - HISTONE H2A (PTHR23430:SF50) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 151  
Kegg Orthology  K11251
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0000786 nucleosome A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.
GO:0046982 protein heterodimerization activity Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10013023mg 1 150 + 150 none 100.00 150 96.67 5e-96 hypothetical protein
blastp_kegg lcl|cit:102624415 1 150 + 150 none 100.00 150 96.67 5e-96 histone H2A-like
blastp_kegg lcl|eus:EUTSA_v10014920mg 1 150 + 150 Gaps:2 100.00 152 87.50 2e-86 hypothetical protein
blastp_kegg lcl|csv:101217199 1 150 + 150 Gaps:2 100.00 152 88.16 2e-85 probable histone H2A.4-like
blastp_kegg lcl|sita:101769640 5 150 + 146 Gaps:4 94.34 159 88.00 1e-81 histone H2A-like
blastp_kegg lcl|cmo:103490019 1 150 + 150 Gaps:3 100.00 153 88.24 5e-81 probable histone H2A.4
blastp_kegg lcl|pvu:PHAVU_007G118400g 1 150 + 150 Gaps:1 100.00 149 83.89 1e-80 hypothetical protein
blastp_kegg lcl|pmum:103339877 1 150 + 150 Gaps:2 100.00 152 89.47 1e-79 histone H2A-like
blastp_kegg lcl|pper:PRUPE_ppa012844mg 1 150 + 150 Gaps:2 100.00 152 89.47 1e-79 hypothetical protein
blastp_kegg lcl|mus:103999812 19 150 + 132 Gaps:1 86.18 152 94.66 2e-79 histone H2A-like
blastp_pdb 1p3p_G 13 138 + 126 none 97.67 129 72.22 1e-57 mol:protein length:129 Histone H2A
blastp_pdb 1p3p_C 13 138 + 126 none 97.67 129 72.22 1e-57 mol:protein length:129 Histone H2A
blastp_pdb 1p3o_G 13 138 + 126 none 97.67 129 72.22 1e-57 mol:protein length:129 Histone H2A
blastp_pdb 1p3o_C 13 138 + 126 none 97.67 129 72.22 1e-57 mol:protein length:129 Histone H2A
blastp_pdb 1p3m_G 13 138 + 126 none 97.67 129 72.22 1e-57 mol:protein length:129 Histone H2A
blastp_pdb 1p3m_C 13 138 + 126 none 97.67 129 72.22 1e-57 mol:protein length:129 Histone H2A
blastp_pdb 1p3l_G 13 138 + 126 none 97.67 129 72.22 1e-57 mol:protein length:129 Histone H2A
blastp_pdb 1p3l_C 13 138 + 126 none 97.67 129 72.22 1e-57 mol:protein length:129 Histone H2A
blastp_pdb 1p3k_G 13 138 + 126 none 97.67 129 72.22 1e-57 mol:protein length:129 Histone H2A
blastp_pdb 1p3k_C 13 138 + 126 none 97.67 129 72.22 1e-57 mol:protein length:129 Histone H2A
blastp_uniprot_sprot sp|Q9M531|H2A_EUPES 1 150 + 150 Gaps:3 100.00 153 90.20 2e-82 Histone H2A OS Euphorbia esula PE 2 SV 1
blastp_uniprot_sprot sp|Q9LZ46|H2A4_ARATH 1 150 + 150 Gaps:3 100.00 153 86.93 3e-81 Probable histone H2A.4 OS Arabidopsis thaliana GN At5g02560 PE 1 SV 1
blastp_uniprot_sprot sp|Q2HU68|H2A1_MEDTR 19 150 + 132 Gaps:1 88.51 148 91.60 2e-78 Probable histone H2A.1 OS Medicago truncatula GN MtrDRAFT_AC149210g1v1 PE 1 SV 1
blastp_uniprot_sprot sp|P19177|H2A_PETCR 19 150 + 132 none 88.59 149 90.15 5e-78 Histone H2A OS Petroselinum crispum PE 2 SV 1
blastp_uniprot_sprot sp|Q75L11|H2A6_ORYSJ 1 135 + 135 Gaps:2 87.82 156 89.78 2e-77 Probable histone H2A.6 OS Oryza sativa subsp. japonica GN Os05g0113900 PE 2 SV 2
blastp_uniprot_sprot sp|A2XZN0|H2A6_ORYSI 1 135 + 135 Gaps:2 87.82 156 89.78 2e-77 Probable histone H2A.6 OS Oryza sativa subsp. indica GN OsI_017523 PE 3 SV 2
blastp_uniprot_sprot sp|P25469|H2A1_SOLLC 6 150 + 145 Gaps:3 97.26 146 85.92 2e-76 Histone H2A.1 OS Solanum lycopersicum PE 2 SV 1
blastp_uniprot_sprot sp|Q2HU65|H2A2_MEDTR 24 150 + 127 Gaps:3 84.97 153 90.77 2e-74 Probable histone H2A.2 OS Medicago truncatula GN MtrDRAFT_AC149210g4v1 PE 3 SV 1
blastp_uniprot_sprot sp|Q6L500|H2A4_ORYSJ 24 150 + 127 Gaps:7 82.21 163 88.06 6e-74 Probable histone H2A.4 OS Oryza sativa subsp. japonica GN Os05g0461400 PE 2 SV 1
blastp_uniprot_sprot sp|A2Y5G8|H2A4_ORYSI 24 150 + 127 Gaps:7 82.21 163 88.06 6e-74 Probable histone H2A.4 OS Oryza sativa subsp. indica GN OsI_019561 PE 3 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 9 150 142 PTHR23430:SF50 none none none
PRINTS 80 94 15 PR00620 none Histone H2A signature IPR002119
PRINTS 66 79 14 PR00620 none Histone H2A signature IPR002119
PRINTS 108 126 19 PR00620 none Histone H2A signature IPR002119
PRINTS 22 44 23 PR00620 none Histone H2A signature IPR002119
PRINTS 51 66 16 PR00620 none Histone H2A signature IPR002119
Gene3D 14 130 117 G3DSA:1.10.20.10 none none IPR009072
SUPERFAMILY 13 135 123 SSF47113 none none IPR009072
SMART 11 131 121 SM00414 none Histone 2A IPR002119
Pfam 26 99 74 PF00125 none Core histone H2A/H2B/H3/H4 IPR007125
PANTHER 9 150 142 PTHR23430 none none none
ProSitePatterns 30 36 7 PS00046 none Histone H2A signature. IPR002119

0 Localization

0 Qtllist

0 Targeting